DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpina3f

DIOPT Version :10

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001028507.2 Gene:Serpina3f / 238393 MGIID:2182838 Length:445 Species:Mus musculus


Alignment Length:392 Identity:121/392 - (30%)
Similarity:193/392 - (49%) Gaps:44/392 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL----- 66
            |.||:| :..|...||:.|..:|.|:|::.||.|:..||:|..:||:..|.:|:.:.||.     
Mouse    35 LTLASS-NTDFAFSLYKELVLKNPDENVVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLTET 98

  Fly    67 --PDDKKEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISAN 129
              ||    :...|:.||..|....:...:|..:.:::....:::.|:.:..:..::|||......
Mouse    99 PEPD----IHQGFRYLLDLLSQPGNQVQISTGSALFIEKHLQILAEFKEKARALYQAEAFTADFQ 159

  Fly   130 NPKITASIVNKWVDTQTSGKIRDLVMPSDVANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHISD 193
            .|.....::|.:|...|.|||::|:...|...| :|::|.|||||:|:..|:.:.| ||:|::.:
Mouse   160 QPLEATKLINDYVSNHTQGKIKELISDLDKRTL-MVLVNYIYFKGKWEMPFDPDDTCKSEFYLDE 223

  Fly   194 QKSVPVQMM---SLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDKVDGLPELEKKMVGFT- 254
            .:||.|.||   :|..|:  ..|.||...|:||.| ..|.|.:..|||: ..:.::|..:...| 
Mouse   224 NRSVKVPMMKINNLTTPY--FRDEELSCTVVELKY-TGNASAMFILPDQ-GKMQQVEASLQPETL 284

  Fly   255 --------PKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVV 311
                    |:|||   .|.||||.|.....||.:|..:||::.|.|.||.:.:..........||
Mouse   285 RNWKDSLKPRLIN---ELCLPKFSISTDYSLEHILPELGIRELFSTQADLSAITGTKDLRTSQVV 346

  Fly   312 HKAFLEVNEEGSEAAAATAVVFRYKSIRS-----PPMDFNVNHPFAYVIRDAEN--IYFQGHFVN 369
            |||.|:|.|.|:||||.|.    |::::.     ..|....:.||..:|.|...  ..|.....|
Mouse   347 HKAVLDVAETGTEAAAGTG----YQNLQCCQGVIYSMKIYFDRPFLMIISDTNTHIALFMAKVSN 407

  Fly   370 PE 371
            ||
Mouse   408 PE 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 serpin42Dd-like_insects 12..370 CDD:381070 115/384 (30%)
Serpina3fNP_001028507.2 serpinA3_A1AC 27..409 CDD:381019 119/390 (31%)
RCL 357..382 8/28 (29%)

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