DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpinf1

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_035470.3 Gene:Serpinf1 / 20317 MGIID:108080 Length:417 Species:Mus musculus


Alignment Length:391 Identity:120/391 - (30%)
Similarity:193/391 - (49%) Gaps:58/391 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMR-----DVLKLPD 68
            ||.:|| .|..|||:|.:..:...|::.|||||..|||...:||..:|...:.     |::..||
Mouse    53 LAAAVS-NFGYDLYRLRSSASPTGNVLLSPLSVATALSALSLGAEHRTESVIHRALYYDLITNPD 116

  Fly    69 DKKEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAE-------AI 126
                :.:.:|:||:.:...|.  .|..|:||....|.:        ||.||.|..|       .|
Mouse   117 ----IHSTYKELLASVTAPEK--NLKSASRIVFERKLR--------VKSSFVAPLEKSYGTRPRI 167

  Fly   127 SANNPKITASIVNKWVDTQTSGKI----RDLVMPSDVANLVLVILNAIYFKGQWQKKFNTEQTK- 186
            ...||::....:|.||..|..|||    |:  |||   .|.:::|...||||||..||::.:|. 
Mouse   168 LTGNPRVDLQEINNWVQAQMKGKIARSTRE--MPS---ALSILLLGVAYFKGQWVTKFDSRKTTL 227

  Fly   187 SDFHISDQKSVPVQMMS---LVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDKV-DGLPELE 247
            .|||:.:.::|.|.|||   .:..:|:  |.:|...:.:||...| :|::.|||..| ..|..:|
Mouse   228 QDFHLDEDRTVRVPMMSDPKAILRYGL--DSDLNCKIAQLPLTGS-MSIIFFLPLTVTQNLTMIE 289

  Fly   248 KKMVG-----FTPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHV 307
            :.:..     ...:|..|...|.:||.|:.|...|.:.|..|.:|..|: |.||:. :......:
Mouse   290 ESLTSEFIHDIDRELKTIQAVLTVPKLKLSFEGELTKSLQDMKLQSLFE-SPDFSK-ITGKPVKL 352

  Fly   308 GGVVHKAFLEVNEEGSEAAAATAVVFRYKSIR-SPPMDFNVNHPFAYVIRDAEN--IYFQGHFVN 369
            ..|.|:|..|.||||:.::.:..:    :.:| :.|:|:::|.||.:|:||.:.  :.|.|..::
Mouse   353 TQVEHRAAFEWNEEGAGSSPSPGL----QPVRLTFPLDYHLNQPFLFVLRDTDTGALLFIGRILD 413

  Fly   370 P 370
            |
Mouse   414 P 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 116/384 (30%)
Serpinf1NP_035470.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..41
PEDF 39..414 CDD:239007 119/389 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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