DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and srp-8

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:379 Identity:101/379 - (26%)
Similarity:164/379 - (43%) Gaps:43/379 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DDLYQLLAKENAD------------KNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKLPDDKK 71
            |.|::.|:|..|:            ::.:.||:::.:||...|..|||:|..::.|.|.......
 Worm     5 DKLHEFLSKSEAEFALKLLHQQDHSQSFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNATDG 69

  Fly    72 EVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITAS 136
            |:...|.::.:.|...:....:.:.|.|...|..|........||..:..|..:...:|.|.|..
 Worm    70 EMVTHFSNVSTALSAMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIK 134

  Fly   137 IVNKWVDTQTSGKIRDLVMPSDV-ANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHISDQKSVPV 199
            .:||.:...|.|.|:.:.....: .:.|:|.|:|..|:.|||.||:...| |.:|..:......:
 Worm   135 TINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEFFCTANSHRNI 199

  Fly   200 QMMSLVRPFGVSYDRELGAN----------VIELPYRNSNLSMVIFLPDKVDGLPELEKKMVGFT 254
            :.:           ...|||          |:.|||.:|:..|.||||.:..||.|..|.:...|
 Worm   200 KFL-----------HATGANRKYCENDKFQVLSLPYTDSSFEMTIFLPKEQFGLAEALKTLGTST 253

  Fly   255 PKLININ-----VHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKA 314
            .:.:..|     |::::|.::.|....|...|.|:||......||...:...|  .|:...:|||
 Worm   254 IQELKSNVSNYLVNVQIPIWRNETEIDLNSTLQAIGITKILNESAYIGNFAEN--VHISEFIHKA 316

  Fly   315 FLEVNEEGSEAAAATAVVF-RYKSIRSPPMDFNVNHPFAYVIRDAENIYFQGHF 367
            .:||||.|:..|..|.|:. |::.......||..:|||.|.|....:|.|.|.|
 Worm   317 IIEVNENGTSPATNTKVITKRWREETGEIRDFIADHPFLYTIHYKNSILFMGVF 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 101/379 (27%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 96/368 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.930

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