DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and srp-8

DIOPT Version :10

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:379 Identity:101/379 - (26%)
Similarity:164/379 - (43%) Gaps:43/379 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DDLYQLLAKENAD------------KNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKLPDDKK 71
            |.|::.|:|..|:            ::.:.||:::.:||...|..|||:|..::.|.|.......
 Worm     5 DKLHEFLSKSEAEFALKLLHQQDHSQSFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNATDG 69

  Fly    72 EVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITAS 136
            |:...|.::.:.|...:....:.:.|.|...|..|........||..:..|..:...:|.|.|..
 Worm    70 EMVTHFSNVSTALSAMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIK 134

  Fly   137 IVNKWVDTQTSGKIRDLVMPSDV-ANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHISDQKSVPV 199
            .:||.:...|.|.|:.:.....: .:.|:|.|:|..|:.|||.||:...| |.:|..:......:
 Worm   135 TINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEFFCTANSHRNI 199

  Fly   200 QMMSLVRPFGVSYDRELGAN----------VIELPYRNSNLSMVIFLPDKVDGLPELEKKMVGFT 254
            :.:           ...|||          |:.|||.:|:..|.||||.:..||.|..|.:...|
 Worm   200 KFL-----------HATGANRKYCENDKFQVLSLPYTDSSFEMTIFLPKEQFGLAEALKTLGTST 253

  Fly   255 PKLININ-----VHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKA 314
            .:.:..|     |::::|.::.|....|...|.|:||......||...:...|  .|:...:|||
 Worm   254 IQELKSNVSNYLVNVQIPIWRNETEIDLNSTLQAIGITKILNESAYIGNFAEN--VHISEFIHKA 316

  Fly   315 FLEVNEEGSEAAAATAVVF-RYKSIRSPPMDFNVNHPFAYVIRDAENIYFQGHF 367
            .:||||.|:..|..|.|:. |::.......||..:|||.|.|....:|.|.|.|
 Worm   317 IIEVNENGTSPATNTKVITKRWREETGEIRDFIADHPFLYTIHYKNSILFMGVF 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 serpin42Dd-like_insects 12..370 CDD:381070 101/379 (27%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 96/368 (26%)

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