DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and srp-7

DIOPT Version :10

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:362 Identity:117/362 - (32%)
Similarity:191/362 - (52%) Gaps:21/362 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKLPDDKKEVAAKFKDLLS 82
            ||....||.::|..::|..||||:.:||||.::.|:|:|..::|:.|......:::...|.::.:
 Worm    16 TDFGLGLLRQQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISA 80

  Fly    83 KLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITASIVNKWVDTQTS 147
            .|...|....:.|||.::....||:...|...||..:.|.|.::..:|.:.||..:|.:|...|.
 Worm    81 ALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTG 145

  Fly   148 GKIRDLVMPSDV-ANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHISDQKSVPVQMMSLVRPFGV 210
            ..|:.::....: ::||.|:.||:|||..||.||..:.| ||:|..|......:..:     ...
 Worm   146 DHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFL-----HAS 205

  Fly   211 SYDRELGAN----VIELPYRNSNLSMVIFLPDKVDGLPELEKKMVGFTPK--LINI---NVHLRL 266
            |..|:...|    |:.|||:::..::.||||....||.|..|.:...|.:  |.|:   :|::::
 Worm   206 SVSRDYAENDQFQVLSLPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQI 270

  Fly   267 PKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKAFLEVNEEGSEAAAATAV 331
            ||:|||....||:.|.::||:.||...||..::.  .|.:|..|.|||.:||:|||::|||||.|
 Worm   271 PKWKIETKLGLEEALQSLGIKKAFDNDADLGNMA--DGLYVSKVTHKALIEVDEEGTKAAAATTV 333

  Fly   332 VFRYKS---IRSPPMDFNVNHPFAYVIRDAENIYFQG 365
            ....||   :...|.||..:|||.:|:....:..|.|
 Worm   334 SISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 serpin42Dd-like_insects 12..370 CDD:381070 117/362 (32%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 117/362 (32%)

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