DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and srp-7

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:362 Identity:117/362 - (32%)
Similarity:191/362 - (52%) Gaps:21/362 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKLPDDKKEVAAKFKDLLS 82
            ||....||.::|..::|..||||:.:||||.::.|:|:|..::|:.|......:::...|.::.:
 Worm    16 TDFGLGLLRQQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISA 80

  Fly    83 KLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITASIVNKWVDTQTS 147
            .|...|....:.|||.::....||:...|...||..:.|.|.::..:|.:.||..:|.:|...|.
 Worm    81 ALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTG 145

  Fly   148 GKIRDLVMPSDV-ANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHISDQKSVPVQMMSLVRPFGV 210
            ..|:.::....: ::||.|:.||:|||..||.||..:.| ||:|..|......:..:     ...
 Worm   146 DHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFL-----HAS 205

  Fly   211 SYDRELGAN----VIELPYRNSNLSMVIFLPDKVDGLPELEKKMVGFTPK--LINI---NVHLRL 266
            |..|:...|    |:.|||:::..::.||||....||.|..|.:...|.:  |.|:   :|::::
 Worm   206 SVSRDYAENDQFQVLSLPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQI 270

  Fly   267 PKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKAFLEVNEEGSEAAAATAV 331
            ||:|||....||:.|.::||:.||...||..::.  .|.:|..|.|||.:||:|||::|||||.|
 Worm   271 PKWKIETKLGLEEALQSLGIKKAFDNDADLGNMA--DGLYVSKVTHKALIEVDEEGTKAAAATTV 333

  Fly   332 VFRYKS---IRSPPMDFNVNHPFAYVIRDAENIYFQG 365
            ....||   :...|.||..:|||.:|:....:..|.|
 Worm   334 SISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 117/362 (32%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 117/362 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10598
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.960

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