DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpini2

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001127881.1 Gene:Serpini2 / 171149 RGDID:619897 Length:405 Species:Rattus norvegicus


Alignment Length:390 Identity:117/390 - (30%)
Similarity:205/390 - (52%) Gaps:28/390 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLLATSVSCR--------FTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRD 62
            ||.|:.|.:.|        |..|||:.::..|.: |:|.|||...:.|.:..:||:||..|::..
  Rat    10 LLFLSGSQTSRTMDQKNAEFAVDLYKAISLSNKN-NVIFSPLGTTVLLGMVQLGAKGKAQQQIMQ 73

  Fly    63 VLKLPDDKKEVAAKF---KDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAE 124
            .|::  .|.....:|   |.|.|.:..::.....:||:.:|:...|.:...|....|:.|::..:
  Rat    74 TLRM--QKTSTGEEFSVLKSLFSAISKKKQEFTFNLASALYLQEGFIVKESYLHSNKEFFQSATK 136

  Fly   125 AISANNPKITASIVNKWVDTQTSGKIRDLVMPSDVANLV-LVILNAIYFKGQWQKKFNTEQTK-S 187
            .:...:.|.:|..::.||:::|.|||:::....|...|. ||::|||||||.|::||..|.|: :
  Rat   137 LVDFLDAKTSAQAISTWVESKTDGKIKNMFSEEDFGPLTRLVLVNAIYFKGDWKQKFRKEDTEMT 201

  Fly   188 DFHISDQKSVPVQMM-SLVR-PFGVSYDRELGANVIELPYRNSNLSMVIFLPDKVDGLPELEKKM 250
            ||...|..:|.:.|| :|:| .:|...:..:...|:||||:....|:||.||.:...:.|:||::
  Rat   202 DFSKKDGSTVKIPMMKALLRAKYGYFSESSMTYQVLELPYKADEFSLVILLPTEDVNIEEVEKQV 266

  Fly   251 VG-----FTPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGV 310
            ..     :..:|....|.:.||:||||.....::.|.::.:.:.|....|.:.:..:|..:|...
  Rat   267 TARHVQKWFSELHEEEVEVSLPRFKIEQKLDFKEALFSLNVTEIFSGGCDLSGITDSSELYVSRA 331

  Fly   311 VHKAFLEVNEEGSEAAAATAVVFRYKSIRS-PPMDFNVNHPFAYVIR--DAENIYFQGHFVNPEL 372
            :.|.|.|:||:||||||:|.:  ...:|.| ....|..||||.::::  ..|:|.|.|...:|::
  Rat   332 MQKVFFEINEDGSEAAASTGI--NIPAIMSLTQTQFLANHPFLFIMKHIQTESILFMGKVTDPDI 394

  Fly   373  372
              Rat   395  394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 112/378 (30%)
Serpini2NP_001127881.1 SERPIN 23..405 CDD:294093 112/377 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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