DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpina3c

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:381 Identity:118/381 - (30%)
Similarity:187/381 - (49%) Gaps:27/381 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL---PDD 69
            |...|::..|...||:.||.:|.|.|::.||||:..||::..:||:|.|.:|:.:.|..   ...
Mouse    64 LTLASINTDFAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETP 128

  Fly    70 KKEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKIT 134
            :.::...|..||.:|........:|..:.::|....:::.|:.:..:..::|||.......|...
Mouse   129 EADIHQGFGHLLQRLSHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEA 193

  Fly   135 ASIVNKWVDTQTSGKIRDLVMPSDVANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHISDQKSVP 198
            ..::|.:|..||..||:.|:...|...| :|::|.|||||:|:..||...| :|:|::..::||.
Mouse   194 TKLINDYVSNQTQRKIKGLISDLDTDTL-MVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSVK 257

  Fly   199 VQMM---SLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPD-----KVDG--LPE-LEKKMVG 252
            |.||   :|..|:  ..|.||...|:||.|: .|.|.:..|||     :|:.  .|| |.|....
Mouse   258 VPMMKIKTLTTPY--FRDEELSCTVVELKYK-GNASALFILPDQGRMQQVEASLQPETLRKWKNS 319

  Fly   253 FTPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKAFLE 317
            ..|:.:.   .|.||||.|.....|:.:|..:||::.|...||.:.:.......|..:||||.|:
Mouse   320 LRPRKMG---ELYLPKFSISTDYSLKNILPELGIKEIFSKQADLSGITGTKDLIVSQMVHKAVLD 381

  Fly   318 VNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVI--RDAENIYFQGHFVNPE 371
            |.|.|:|..|||.|.||..|.|:   ....|..|..||  .|.:...|.....:|:
Mouse   382 VAETGTEGVAATGVNFRILSRRT---SLWFNRTFLMVISHTDVQTTLFIAKITHPK 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 115/372 (31%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 117/379 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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