DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpini1

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_446231.1 Gene:Serpini1 / 116459 RGDID:619896 Length:410 Species:Rattus norvegicus


Alignment Length:408 Identity:125/408 - (30%)
Similarity:203/408 - (49%) Gaps:47/408 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYLCLLLLATSVS----CRFTDD--------LYQLLAKENADKNLITSPLSVEIALSLAYMGAR 53
            |.||.||.|....|    ..|.|:        :|..|.....|:|::.||||:.:|:.:..:||:
  Rat     1 MAYLGLLSLVALQSLVTGAAFPDETIAEWSVNVYNHLRATGEDENILFSPLSIALAMGVMELGAQ 65

  Fly    54 GKTAQEMRDVLKLPDDKK-EVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKD 117
            |.|.:|:|..:.....|. |..:..:|..|.:...|...::.:||.::|.|.|.:..|:.||:|.
  Rat    66 GSTLKEIRHSMGYESLKSGEEFSFLRDFSSMVSAEEGQYVMKIANSLFVQNGFHINEEFLQMMKM 130

  Fly   118 SFKAEAEAISANNPKITASIVNKWVDTQTSGKIRDLVMPSD---VANLVLVILNAIYFKGQWQKK 179
            .|.||...:..:.....|:.:||||:..|:..::|||.|.|   |.:|.|:  ||:||||.|:.:
  Rat   131 YFNAEVNHVDFSENVAVANYINKWVENYTNSLLKDLVSPGDFDAVTHLALI--NAVYFKGNWKSQ 193

  Fly   180 FNTEQTKS-DFHISDQKSVPVQMMSLVRPFGVSYDREL--GAN-------VIELPYRNSNLSMVI 234
            |..|.|:: .|...|:..|.:.||.....|   |..|.  |:|       |:|:||....:||::
  Rat   194 FRPENTRTFSFTKDDESEVQIPMMYQQGEF---YYGEFSDGSNEAGGIYQVLEIPYEGDEISMML 255

  Fly   235 FLPDKVDGLPELEKKMVGFTPKLI--------NINVHLRLPKFKIEFSARLEQVLIAMGIQDAFK 291
            .|..:...|..||..:   .|:||        ...|.:.||:|.:|....|:.:|.|:|:.:.|.
  Rat   256 VLSRQEVPLATLEPLL---KPQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEIFI 317

  Fly   292 TSADFNDLVANSGAHVGGVVHKAFLEVNEEGSEAAAATAVV-FRYKSIRSPPMDFNVNHPFAYVI 355
            ..|:...:.......:...|||:|:||||||||||.|:.:: ....::..|.:  .|:|||.::|
  Rat   318 KDANLTAMSDKKELFLSKAVHKSFIEVNEEGSEAAVASGMIAISRMAVLFPQV--IVDHPFLFLI 380

  Fly   356 RDAE--NIYFQGHFVNPE 371
            ::.:  .|.|.|..::||
  Rat   381 KNRKTGTILFMGRVMHPE 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 117/392 (30%)
Serpini1NP_446231.1 neuroserpin 23..410 CDD:239003 117/386 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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