DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and SRP2

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:411 Identity:120/411 - (29%)
Similarity:187/411 - (45%) Gaps:61/411 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 TADVTMADAAH------QEFARRLALFSINVYGK-LSGQKPGENIVFSPFSIQTCAAMARLGAEN 85
            |||.:::....      ||..:.....|:.:.|| :|......|.||||.||.....:.....:|
plant    15 TADPSLSKTNKKQKIDMQEAMKNQNEVSLLLVGKVISAVAKNSNCVFSPASINAVLTVTAANTDN 79

  Fly    86 ETATQLDQGLGLASSDPEQIAHSFHQVLA-AYQDSQ-----ILRIANKIFVMDGYQLRQEFDQLL 144
            :|........ |.||..|:....||::.: .::|..     .:...|.:::........:::.|.
plant    80 KTLRSFILSF-LKSSSTEETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLF 143

  Fly   145 SKQFLSAAQSVDF-SKNVQAAATINNWVEQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQH 208
            ...|.::...||| .|..:....:|.|..:.||.|||:::|...:.|.:..:..||::|||.|:.
plant   144 LNFFKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAWEK 208

  Fly   209 QFAKHLTRPDTFHLDGERTVQVPMM-SLKERFRYADLPALDAM-ALELPYK------DSDLSMLI 265
            .|.|.:||...|||...::|.||.| |.:::|    :.|.|.. .|.|||:      :.:.||.:
plant   209 AFDKSMTRDKPFHLLNGKSVSVPFMRSYEKQF----IEAYDGFKVLRLPYRQGRDDTNREFSMYL 269

  Fly   266 VLPNTKTGLPALEEKLRLTTL-----SQITQSLYETKVA-LKLPRFKAEFQVELSEVFQKLGMSR 324
            .||:.|..|..|.|  |:|:.     |.|.:  |...|. .::|:||.||..|.|.||...    
plant   270 YLPDKKGELDNLLE--RITSNPGFLDSHIPE--YRVDVGDFRIPKFKIEFGFEASSVFNDF---- 326

  Fly   325 MFSDQAEFGKMLQSPEPLKVSAIIH-KAFIEVNEEGTEAAAATGMAVRRKRAIMSPEEPIEFFAD 388
                            .|.||  :| ||.||::||||||||||.:.|.....:..|::.|:|.||
plant   327 ----------------ELNVS--LHQKALIEIDEEGTEAAAATTVVVVTGSCLWEPKKKIDFVAD 373

  Fly   389 HPFTYVLVHQK-DLPLFWGSV 408
            |||.:::...| ...||.|.:
plant   374 HPFLFLIREDKTGTLLFAGQI 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 115/386 (30%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 115/390 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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