DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and serpind1

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:389 Identity:121/389 - (31%)
Similarity:188/389 - (48%) Gaps:43/389 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RRLAL----FSINVYGKL-SGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGL----- 97
            :||::    |..|:|..: :.....:||:.:|..|.|..|...||.:.:...|:...||.     
 Frog   110 QRLSIINANFGFNLYRAIKNNTDASDNILLAPVGISTAMATISLGTKGQALDQVLFTLGFKNFIN 174

  Fly    98 ASSDPEQIAHSFHQV-------LAAYQDSQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSV 155
            |||..|.:  :.|.|       |........||..|.|:|...:.:|:.|...|...:.:.||.|
 Frog   175 ASSKYEIL--TLHNVFRKLTHRLFRRNFGYTLRSVNDIYVKKDFVIREPFKNNLKNYYFAEAQMV 237

  Fly   156 DF-SKNVQAAATINNWVEQRTNHLIKDLV----PADVLNSESRLVLVNAIHFKGTWQHQFAKHLT 215
            || ||:....|  |..::|.|..|||:.:    ||.:      ::|||.|:|||||:::|....|
 Frog   238 DFGSKDFLTKA--NKRIQQLTKGLIKEALTNVDPALL------MLLVNCIYFKGTWENKFPVEYT 294

  Fly   216 RPDTFHLDGERTVQVPMMSLKERFRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEK 280
            :...|.|:.:..|:||||..|..|..|..|.||...|:|||. .::|||||||:..:|:..||::
 Frog   295 QNMNFRLNEKELVKVPMMKTKGNFLVAADPELDCAVLQLPYV-GNISMLIVLPHKLSGMKLLEKQ 358

  Fly   281 LRLTTLSQITQSLYETKVALKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVS 345
            :....:.:....:......:.|||||.|....|.||...:|::.:|: ..:|..:  |.:.:.:.
 Frog   359 ISPQVVERWQNIMTNRTREVFLPRFKLEKSYNLQEVLSNMGVTDLFT-HGDFSGV--SDKNMNIG 420

  Fly   346 AIIHKAFIEVNEEGTEAAAATGMAVRRKRAIMSPEEPIEFFADHPFTYVLV-HQKDLPLFWGSV 408
            ...|:..|.||||||||||.|.:      ..|.......|.||.||.:::. |:.:..:|.|.|
 Frog   421 LFQHQGTITVNEEGTEAAAVTVV------GFMPLSTQARFVADRPFLFLIYEHRTNCLIFMGRV 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 119/385 (31%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 121/389 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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