DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpinb3a

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_006249702.1 Gene:Serpinb3a / 498209 RGDID:1562868 Length:387 Species:Rattus norvegicus


Alignment Length:391 Identity:138/391 - (35%)
Similarity:209/391 - (53%) Gaps:37/391 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FARRLALFSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGLASS----- 100
            ||:....|::.:|.:|...:  :||.:||.||.|..||.:|||:..|..|:::.:....:     
  Rat     4 FAKATTQFTLELYRQLRDSE--DNIFYSPLSIMTALAMLQLGAKGNTEKQIEKVIQFHETTKKTT 66

  Fly   101 -------DPEQIAHSFHQVLAAY---QDSQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSV 155
                   |.|.:...|.:::...   .|:..|..||.|:....:...|.|.:.:.:.:.:..:|:
  Rat    67 EKSADCHDEESVHEQFQKLMTQLNKSNDAYDLNSANSIYGAKHFPFLQTFLEDIKEYYQANVESL 131

  Fly   156 DFSKNV-QAAATINNWVEQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDT 219
            ||:... ::...||:|||.:||..||||.|...|||.:.||||||::|||.|.|:|.:..|..|.
  Rat   132 DFAHAAEESEKKINSWVENQTNGKIKDLFPKGSLNSSTILVLVNAVYFKGQWNHKFDEKHTEEDK 196

  Fly   220 FHLDGERTVQVPMMSLKERFRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLT 284
            |.|:...:..|.||..|..|.:..|..:.|..:|:|||..:|||.|:||....||..|||:|...
  Rat   197 FWLNKNTSKPVQMMRQKNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEQLTAD 261

  Fly   285 TLSQITQS-------LYETKVALKLPRFKAEFQVELSEVFQKLGMSRMF-SDQAEFGKMLQSPEP 341
            .|.:.|::       ||     |.|||||.|.:.:|....|.:||...| |.:|:|..| .|.:.
  Rat   262 KLLEWTRAENMNMIDLY-----LSLPRFKVEEKYDLPGPLQHMGMVDAFDSKKADFSGM-SSTQG 320

  Fly   342 LKVSAIIHKAFIEVNEEGTEAAAATGMAVRRKRAIMSPEEPIEFFADHPFTYVLVHQ-KDLPLFW 405
            |.||.::||:|:||||||||||||||:.|    ::.|.:...:|..||||.:::.|. .:..||:
  Rat   321 LMVSKVLHKSFVEVNEEGTEAAAATGVEV----SLTSAQITEDFNCDHPFLFLIKHNATNSILFF 381

  Fly   406 G 406
            |
  Rat   382 G 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 136/387 (35%)
Serpinb3aXP_006249702.1 SERPIN 5..387 CDD:294093 137/390 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm12319
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.730

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