DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Da and serpinb1

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001011419.1 Gene:serpinb1 / 496899 XenbaseID:XB-GENE-1217264 Length:377 Species:Xenopus tropicalis


Alignment Length:373 Identity:133/373 - (35%)
Similarity:204/373 - (54%) Gaps:25/373 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGLASSDPEQIAHSFHQV 112
            ||.:::.|::......|:.|||.||.|..||..|||...||.|:.:   :...|..:..||..|.
 Frog    11 FSFDLFRKINENNATGNVFFSPISISTALAMVLLGARGNTAQQISR---ILHFDAVKDLHSNFQT 72

  Fly   113 LAA-----YQDSQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDF-SKNVQAAATINNWV 171
            |.|     ...|..|.:||::|....::...:|...:.||:.:...:||| |....|...||.||
 Frog    73 LNAEINKKNVSSYALNLANRLFGEKSFKFLPDFLSSVKKQYNADLGTVDFISAAEDARKEINTWV 137

  Fly   172 EQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLK 236
            .::|...|.:::.|..:||.::|||||||:|||.|..:|....|:...|.|:.:....|.||...
 Frog   138 SEQTKGKIPEVLSAGAVNSFTKLVLVNAIYFKGDWAKKFKAEHTKDMPFQLNKKEQKTVKMMYQM 202

  Fly   237 ERFRYADLPALDAMALELPYKDSDLSMLIVLPNT----KTGLPALEEKLRLTTLSQITQSLYETK 297
            |:..:..:|.::...|||||.|.:|||:||||:.    .|||..||::|.|..:::.|:::....
 Frog   203 EKLPFNYIPEINCRVLELPYVDYELSMVIVLPDNINDDTTGLQQLEKELSLEKINEWTENMMPID 267

  Fly   298 VALKLPRFKAEFQVELSEVFQKLGMSRMF-SDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTE 361
            |.:.||:||.|...:|......:||:.:| :..|:...|..|.: |.:|.:|||:|:||||||||
 Frog   268 VHVHLPKFKLEDSYKLKSQLAGMGMADLFEAGSADLSGMSGSND-LYLSEVIHKSFVEVNEEGTE 331

  Fly   362 AAAAT-GMAVRRKRAIMSPEEPIEFFADHPFTYVLVHQ--KDLPLFWG 406
            ||||: |:|:   ..:|..|   ||.|:|||.:.:.|.  |.: ||:|
 Frog   332 AAAASAGIAM---MCLMREE---EFNANHPFLFFIRHNATKSI-LFFG 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 133/373 (36%)
serpinb1NP_001011419.1 SERPIN 4..377 CDD:294093 133/373 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm47831
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.030

Return to query results.
Submit another query.