DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and serpina3

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001011275.1 Gene:serpina3 / 496728 XenbaseID:XB-GENE-5933441 Length:414 Species:Xenopus tropicalis


Alignment Length:401 Identity:121/401 - (30%)
Similarity:203/401 - (50%) Gaps:38/401 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DAAHQEFAR--------RLAL------FSINVYGKLSGQKPGE------NIVFSPFSIQTCAAMA 79
            |.:|||.|.        :.||      |::|:|..|..:...|      ||||||.||.|..:|.
 Frog    20 DNSHQEHANGHAGGKIAQEALGSANIDFALNLYKHLVTKTQAEKESTQKNIVFSPLSILTAFSML 84

  Fly    80 RLGAENETATQLDQGLGLASSD-PEQIAH-SFHQVLAAY----QDSQILRIANKIFVMDGYQLRQ 138
            .|||::|:..|:..||.|..:. ||:..| :|..:|...    .|.|: :|.|.:||.|..::..
 Frog    85 LLGAKSESHQQILSGLSLNQTQVPEEDMHEAFEHLLQVLNRPKSDLQV-KIGNAVFVEDTLKILD 148

  Fly   139 EFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDLVPADVLNSESRLVLVNAIHFK 203
            .|.|.:...:.:......|....:|...||::|..:|...|::||..  |:..::||::|.|.|.
 Frog   149 SFVQEIEHHYHAEIFPSHFKNPAEAEKQINDFVNNKTEGRIQELVKD--LSEATKLVVINFILFN 211

  Fly   204 GTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKERFRYADLPALDAMALELPYKDSDLSMLIVLP 268
            ..||:.|:...|....|.:|...||:|.|||..:.:::.....:....|:|||| ::.||||::|
 Frog   212 AEWQNPFSSFFTHSRQFSVDENTTVEVQMMSKTDLYQFYKDEKIPCSVLQLPYK-NNASMLIIVP 275

  Fly   269 NTKTGLPALEEKLRLTTLSQITQSLYETKVALKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFG 333
            .... :..:||.|.:.||.:.|.|..::...|.||:|.....::|.::...:||..:|:|.|:|.
 Frog   276 ELGK-IHEVEEALSVETLKRWTSSAEKSFFELFLPKFSISSSLKLKDILTDMGMGIIFTDAADFS 339

  Fly   334 KMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATGMAVRRKRAIMSPEEPIEFFADHPFTYVLVHQ 398
            .:.::.. ||:|.::|||.:.|.|.|||||||:.:     ..::: ...::|..|.||..::..|
 Frog   340 GISENSR-LKLSKVVHKAVLNVAENGTEAAAASAV-----EGVLT-SLMVQFVVDKPFITLICSQ 397

  Fly   399 KDLPLFWGSVV 409
            :...:.:.|.|
 Frog   398 EPYSILFMSRV 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 114/380 (30%)
serpina3NP_001011275.1 serpinA 43..411 CDD:381073 114/378 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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