DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Da and Spn77Bb

DIOPT Version :10

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster


Alignment Length:364 Identity:88/364 - (24%)
Similarity:162/364 - (44%) Gaps:61/364 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 GAENETATQLDQGLGLASSDPE-----QIAHSFHQVLA----------AYQDS----QILRIANK 127
            |||..|..:|...||:....|.     :...::|.:.:          ||.|.    ::::..|.
  Fly    20 GAEGYTVNELRDVLGIYVDYPTLRRWYEDVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNS 84

  Fly   128 IFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDLVPADVLNSES 192
            : |::|.   .|.:.:|.:   ...:.|||.:.  |:..||:.:::.::..|.........||..
  Fly    85 V-VLEGV---GEGNVVLRE---GRPRGVDFDQG--ASIIINDDIDKASHAKIFSSYSRRSFNSTV 140

  Fly   193 RLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTV-QVPMMSLKERFRYA-DLPALDAMALELP 255
            .::.:...:||..|::.|.|..|:.:.|:.||.... :|.||....::.|. ::..|.|..||||
  Fly   141 TVLGITVSYFKAKWKYPFDKSQTKVEQFYNDGGSPAGKVEMMVQTGKYAYVNNVKGLQADVLELP 205

  Fly   256 YKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSL----YETKVALKLPRFKAEFQVELSEV 316
            :.:.:|.|:::||.:..|:..:..:|:...|.::.:.|    .||.|.:|||:|.....:.|.:.
  Fly   206 FGEHELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEKLEASKNETDVEVKLPKFDTRSVLSLEDT 270

  Fly   317 FQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHK----------AFIEVNEEGTEAAAATGMAVR 371
            ....|::.:.:|.|:..|:|        .||.|:          |.|.|:|||..      .||.
  Fly   271 VYDAGLTDLRNDFADLDKLL--------IAIGHRGACLTLYHQFARIVVDEEGLP------NAVP 321

  Fly   372 RKRAIMSPEEPIEFFADHPFTYVLVHQKDLPLFWGSVVR 410
            :|   .|.:..|:|..:.||.|:::.:|...|....|.|
  Fly   322 QK---SSGKNNIKFHVNRPFAYLVLQKKHKLLIHSGVFR 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 86/359 (24%)
Spn77BbNP_649206.1 serpin 13..358 CDD:476815 88/364 (24%)

Return to query results.
Submit another query.