DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and serpinf1

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_989086.1 Gene:serpinf1 / 394686 XenbaseID:XB-GENE-945026 Length:409 Species:Xenopus tropicalis


Alignment Length:405 Identity:112/405 - (27%)
Similarity:187/405 - (46%) Gaps:56/405 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DVTMADAAHQEFARRLAL----FSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQ 90
            :|...|..::....|||.    |..::|...:.:.|..||:.||.||.|..:...||....|.:.
 Frog    29 EVEEEDPFYKSPINRLASSASNFGYDLYRMQANKNPNSNIIISPLSIATSLSSLSLGGGQRTESL 93

  Fly    91 LDQGLGL-ASSDPEQIAHSFHQVLAAYQDSQI--LRIANKIFVMDGYQLRQEFDQLLSK------ 146
            :.:.|.. ..:|||  .|:.::.|.|...||.  |:...:|.:....:||.:|...:.|      
 Frog    94 IQRSLYYDLLNDPE--VHATYKDLLASFTSQASGLKSTWRIMLERRLRLRMDFVTQVEKFYGNKP 156

  Fly   147 QFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDL---VPADVLNSESRLVLVNAIHFKGTWQH 208
            :.|:.:..:|..:       .|::::::|...:...   :|..|     .::|:...:.||.|.:
 Frog   157 KVLTGSTRLDLQE-------ANDFIQKQTQGKVVKFFKEIPTSV-----SILLLGTTYLKGQWAY 209

  Fly   209 QFAKHLTRPDTFHLDGERTVQVPMMSLKE-RFRYADLPALDAMALELPYKDSDLSMLIVLPNTKT 272
            :|....|....||||.:.:|.|||||.|. ..||......:...::||. ...:|::..||||.|
 Frog   210 KFNPRETVQREFHLDEQTSVTVPMMSSKNIPVRYGLDSDFNCKIVQLPL-TGGVSIMFFLPNTVT 273

  Fly   273 -GLPALEEKLRLTTLSQITQSLYETKVALKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKML 336
             .|..:||.|....:..|.|:|....:.|.:|:.|..::.||.|..|:..:..:|: ..:|.|: 
 Frog   274 QNLTMIEEGLTSEFVHDIDQALQPINLVLSVPKLKLNYEAELKEALQESKLQSLFA-TPDFSKI- 336

  Fly   337 QSPEPLKVSAIIHKAFIEVNEEGTEAAAATGMAVRRKRAIMSPEE------PIEFFADHPFTYVL 395
             |.:|||:|.::|||.:|:||||.|.|.             .||:      |:|:..||||.:||
 Frog   337 -SSKPLKLSYVVHKATLELNEEGAETAP-------------KPEDSHRNYFPLEYHLDHPFLFVL 387

  Fly   396 -VHQKDLPLFWGSVV 409
             .:.....||.|.|:
 Frog   388 RANDNGALLFIGKVM 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 108/387 (28%)
serpinf1NP_989086.1 serpinF1_PEDF 31..402 CDD:381008 110/401 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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