DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpinb1c

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:374 Identity:133/374 - (35%)
Similarity:195/374 - (52%) Gaps:23/374 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LFSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGLASSDPEQIAHSFHQ 111
            ||::.::..|:...|..|.:|||.||.:..||..|||...||.||.:.|...|::.   .||..|
Mouse    43 LFALELFHTLNESNPTGNTIFSPVSISSALAMVYLGARGSTAAQLSKTLHFDSAED---IHSQFQ 104

  Fly   112 VLAAYQD----SQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFS-KNVQAAATINNWV 171
            .|.|...    |..|::||:::....|....|:...:.|.:.:....|||. .:..|...||.||
Mouse   105 SLTAEVSKRGASHTLKLANRLYGEKTYNFLPEYLASIQKTYSADLALVDFQHASEDARKEINQWV 169

  Fly   172 EQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLK 236
            :.:|...|::|....|::|.::||||||.:|||.||.:|....|....|.|..:.|..|.||.||
Mouse   170 KGQTEEKIQELFAVGVVDSMTKLVLVNATYFKGMWQKKFMARDTTDAPFRLSKKVTKTVKMMYLK 234

  Fly   237 ERFRYADLPALDAMALELPYKDSDLSMLIVLP----NTKTGLPALEEKLRLTTLSQITQSLYETK 297
            ....:..:|.|....||:||:..:|||:|:||    :..|||..:|::|.|..| |..::|....
Mouse   235 NNLPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDETTGLEEIEKQLTLEKL-QECENLQNID 298

  Fly   298 VALKLPRFKAEFQVELSEVFQKLGMSRMF-SDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTE 361
            |.:|||:||.|....|:....:||:..:| |.:|:...|..|.: |.:|.|:||:::||||||||
Mouse   299 VCVKLPKFKMEESYILNSNLGQLGVQDLFSSSKADLSGMSGSRD-LFISKIVHKSYVEVNEEGTE 362

  Fly   362 A-AAATGMAVRRKRAIMSPEEPIEFFADHPFTYVLVHQKDL-PLFWGSV 408
            . ||..|..|  ...:|    |:||..||||.:.:.|.... .||.|.|
Mouse   363 TDAAMPGTVV--GCCLM----PMEFTVDHPFLFFIRHNPTAHVLFLGRV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 132/372 (35%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 133/374 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm44262
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.830

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