DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Da and AT1G62160

DIOPT Version :10

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_176407.2 Gene:AT1G62160 / 3767608 AraportID:AT1G62160 Length:220 Species:Arabidopsis thaliana


Alignment Length:194 Identity:56/194 - (28%)
Similarity:78/194 - (40%) Gaps:45/194 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 PMMSLKERFRYADLPALDAM-ALELPYK------DSDLSMLIVLPNTKTGLPALEEKLRLTT--L 286
            |.|...:.|....:.|.|.. .|.|||:      :.:.||...||:.|..|..|.:::..|.  |
plant    51 PKMRGHKNFEKQYIAAYDGFKVLRLPYRQGRDNTNRNFSMYFYLPDKKGELDDLLKRMTSTPGFL 115

  Fly   287 SQITQSLYETKVALKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKA 351
            ...|..........::|:||.||..|.|.||....:...|                     ..||
plant   116 DSHTPRERVEVDEFRIPKFKIEFGFEASSVFSDFEIDVSF---------------------YQKA 159

  Fly   352 FIEVNEEGTEAAAATGMAVRRKRAIMSPE------EPIEFFADHPFTYVL-VHQKDLPLFWGSV 408
            .||::||||||||||        |.:..|      |.::|.|||||.::: ..|....||.|.:
plant   160 LIEIDEEGTEAAAAT--------AFVDNEDGCGFVETLDFVADHPFLFLIREEQTGTVLFAGQI 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 55/191 (29%)
AT1G62160NP_176407.2 serpin 1..218 CDD:476815 56/194 (29%)

Return to query results.
Submit another query.