DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Spn28Da

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster


Alignment Length:404 Identity:116/404 - (28%)
Similarity:204/404 - (50%) Gaps:42/404 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CWLLPLLGLALFPFPPVHTADVTMADAAHQEFARRLALFSINVYGKLSGQKPGENIVFSPFSIQT 74
            ||:|.             |..|             |..|:..:|..........||:.||..::.
  Fly     5 CWILV-------------TTSV-------------LGQFTKQLYRSFLQDNKQYNIIASPLCVEI 43

  Fly    75 CAAMARLGAENETATQLDQGLGLASSDPEQIAHSFHQVLAAYQDSQ---ILRIANKIFVMDGYQL 136
            ..:|..:||:..||.:|...|.| ..|.:.:|..:.::|...:..:   ||.:||::||.:...:
  Fly    44 GMSMILMGADGNTANELRTALNL-PEDKKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGV 107

  Fly   137 RQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKD-LVPADVLNSESRLVLVNAI 200
            .:.:::|::|.|.:.|:::..:..::||..||:||..:|...:|| ::|:|:...|| .|::||.
  Fly   108 NKRYNKLVNKHFRAEAEAIKLADRLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDES-AVMINAA 171

  Fly   201 HFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKERFRYADLPALDAMALELPYKDSDLSMLI 265
            .|||.|:.:|.|..|:|..|::.....|.|.|||...||:.. ...:|.: :|||:..|:|||:|
  Fly   172 FFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMMSQVGRFKMR-TSTIDQI-IELPFAYSNLSMVI 234

  Fly   266 VLPNTKTGLPALEEKLRLTTLSQITQSLYETKVALKLPRFKAEFQVELSEVFQKLGMSRMFSDQA 330
            |||.....|...|..:.  :..||.  |.|..|.::||:||.:|::||.|..:.:|:..:|:..:
  Fly   235 VLPKDNGSLTQAEATIE--SYPQIV--LTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSS 295

  Fly   331 EFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATGMAVRRKRAIMSPEEPIEFFADHPFTYVL 395
            :...:| :....::|.::||||||::|||..|.:|:...:|......:  ..:.|..:.||.: :
  Fly   296 DISVLL-NQSGTRISQVVHKAFIEIDEEGGSAGSASASPIRGLSDYAT--SVVTFTVNSPFVF-M 356

  Fly   396 VHQKDLPLFWGSVV 409
            :...|...|.|.||
  Fly   357 IRDDDNIYFRGRVV 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 109/366 (30%)
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 108/364 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446398
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
98.900

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