DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpina1f

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001101524.1 Gene:Serpina1f / 314406 RGDID:1307899 Length:412 Species:Rattus norvegicus


Alignment Length:417 Identity:90/417 - (21%)
Similarity:182/417 - (43%) Gaps:37/417 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLPLLGL-ALFPFPPVHTADVTMADAAHQEF-ARRLAL----FSINVYGKLSGQKPGENIVFSPF 70
            ||.|:|| .|.|.......|: ..|.....| .|::||    .||.::.:::......||:|||.
  Rat    10 LLLLVGLCCLLPITKTKYEDL-YEDPNIDPFQCRKVALTISNISITLFKEMAQLSVNGNILFSPI 73

  Fly    71 SIQTCAAMARLGAENETATQLDQGLGLASSD-PEQIAHSFHQVL--AAYQDSQI--LRIANKIFV 130
            .:....:|..|||:...:.::.:.|.|..:. ||...|...:.|  |.:|..|:  |:..:.:|:
  Rat    74 RVIAAISMLSLGAKGNESKRILEILRLNKTGLPEAEIHKCFRYLLRAIHQPEQLSPLKSGSGVFI 138

  Fly   131 MDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDLVPADVLNSESRLV 195
            ........:|.:.:...:.|...|::|:...:|...|||::..::|..||::|..  |.:::.:.
  Rat   139 HQDLTPVDKFVEGVKNLYHSDIVSINFTDCRRAKTQINNYMMTKSNKEIKNIVKN--LENDTYMA 201

  Fly   196 LVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPM---MSLKERFRYADLPALDAMALELPYK 257
            :||.|.:.......|.....:...:||:...|::|||   :.|...||..|   |.:..|.....
  Rat   202 VVNYIIWNAKINSDFGCRSVKQKDYHLEQGMTIKVPMIHIVDLNHLFRVED---LSSTVLVFTLL 263

  Fly   258 DSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKVALKLPRFKAEFQVELSEVFQKLGM 322
            .|:.:...::|:... :..:|::|......::.:......|.|:.|........::..:...||:
  Rat   264 ASNFTTYFIIPDIGQ-MQKVEQRLTYPHFRRMRRQSNLRMVNLETPELSLSETHDVESMMNLLGI 327

  Fly   323 SRMFSDQAEFGKMLQSPEPLKVS-AIIHKAFIEVNEEGTEAAAATGMAVRRKRAI----MSPEEP 382
            :.:|::.|....::.  :.|:.| .::.|..:.::::|::...:|  ..:...::    :....|
  Rat   328 TYVFNNDANSSAVMN--DTLQKSFKMVSKVKLTIDDKGSKPGRST--CFKNDGSVDVGYVQFNRP 388

  Fly   383 IEFFADHPFTYVLVHQKDLPLFWGSVV 409
            ...|...|       ..|:|||.|.||
  Rat   389 FLIFIKDP-------TNDVPLFLGRVV 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 77/379 (20%)
Serpina1fNP_001101524.1 serpin 47..410 CDD:422956 77/379 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

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