DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42Da and Serpinb12

DIOPT Version :10

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001129339.1 Gene:Serpinb12 / 304692 RGDID:1566382 Length:421 Species:Rattus norvegicus


Alignment Length:416 Identity:119/416 - (28%)
Similarity:202/416 - (48%) Gaps:63/416 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGL--------------- 97
            |..:.:.::|.....:||...|.|:.....|.||||..::|.|:|:.|..               
  Rat    11 FCFDFFQEISKDDAHKNIFVCPLSLSAAFGMVRLGARGDSAQQIDEVLHFNELPKDERKEPSEPS 75

  Fly    98 -----------------ASSDPEQIAHSFHQVLAAYQDSQILRI-----------ANKIFVMDGY 134
                             ||...:..:.:.|::|..:....:.||           ||:::....:
  Rat    76 SKSKASDSSLEGQKQTTASQGQQGESTNEHRLLGCHFGKLLSRIDRDKAHYTLSMANRLYGEQEF 140

  Fly   135 QLRQEFDQLLSKQFLSAAQSVDFSKNVQ-AAATINNWVEQRTNHLIKDLVPADVLNSESRLVLVN 198
            .:..|:...:::.:.:..:||||.|:.: :...||.|||.::...||:|...:.:::.:.|||||
  Rat   141 PICPEYSDDITEFYHTTIESVDFQKDTEKSREEINFWVESQSQGKIKELFDKEAIDNSTVLVLVN 205

  Fly   199 AIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKERFRYADLPALDAMALELPYKDSDLSM 263
            |::||..|:.:|....|....|.|.......|.||:.|.:||...:..|.|..||:.|....|||
  Rat   206 AVYFKAKWEKEFDSENTVDAPFCLSENEKKTVKMMNQKGQFRIGFIEELQAQILEMKYTTGKLSM 270

  Fly   264 LIVLP-----NTKTGLPALEEKL---RLTTLSQITQSLYETKVALKLPRFKAEFQVELSEVFQKL 320
            |::||     |.|: |..||:|:   :|...|. .:::.|..||:..|:|..|...:|:.|.|.:
  Rat   271 LVLLPSSSEDNVKS-LQELEKKINHEKLLAWSN-PENMSEKPVAISFPQFIMEDSYDLNSVLQDM 333

  Fly   321 GMSRMF-SDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATGMAVRRKRAIMSPEEPIE 384
            |:..:| ..:|:...:.:||. |.:|.::||.|:||:|.||:||||:| ||..::|:.|   .:|
  Rat   334 GIRDVFDGTKADLTGISKSPS-LHLSKVVHKTFVEVDEMGTQAAAASG-AVVAEKALPS---RVE 393

  Fly   385 FFADHPFTYVLVHQ--KDLPLFWGSV 408
            |.|:.||.:.:.|.  :.| ||.|.|
  Rat   394 FNANRPFLFFIRHNGTQSL-LFCGRV 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 117/413 (28%)
Serpinb12NP_001129339.1 serpinB12_yukopin 1..421 CDD:381037 119/416 (29%)

Return to query results.
Submit another query.