DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpinb3

DIOPT Version :10

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:392 Identity:141/392 - (35%)
Similarity:211/392 - (53%) Gaps:35/392 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FARRLALFSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGLA------- 98
            ||:....|::.:|.:|...:  :||.:||.||.|..||.:|||:..|..|:::.|.|:       
  Rat     4 FAKATTQFTLELYRQLRDSE--DNIFYSPLSIMTALAMLQLGAKGNTEKQIEKALQLSETTKKPK 66

  Fly    99 -----SSDPEQIAHSFHQVL-------AAYQDSQILRIANKIFVMDGYQLRQEFDQLLSKQFLSA 151
                 |.|.|.:...|.:::       .||.    |:..|.|:...|:...|.|.:.:.|.:.:.
  Rat    67 EKSADSHDEENVHEQFRKIMNQLNKSNGAYD----LKSPNSIYGAKGFPFLQTFMEDIKKYYQAN 127

  Fly   152 AQSVDFSKNV-QAAATINNWVEQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLT 215
            .:|:||:... ::...||:|||.:||..||||.|...|||.:.||||||::|||.|.|:|.:..|
  Rat   128 VESLDFAHAAEESQKKINSWVENKTNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDEQRT 192

  Fly   216 RPDTFHLDGERTVQVPMMSLKERFRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEK 280
            |.|.|.|:...:..|.||.....|.:..|..:.|..:|:|||..:|||.|:||....||..||||
  Rat   193 REDKFWLNKNTSKPVQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEK 257

  Fly   281 LRLTTLSQIT--QSLYETKVALKLPRFKAEFQVELSEVFQKLGMSRMFSDQ-AEFGKMLQSPEPL 342
            |...||...|  :::..|::.|.|||||.:.:.:|....:.:||...|:.| |:|..| .|.:.|
  Rat   258 LSADTLLAWTSPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGM-SSTKGL 321

  Fly   343 KVSAIIHKAFIEVNEEGTEAAAATGMAVRRKRAIMSPEEPIEFFADHPF-TYVLVHQKDLPLFWG 406
            .||.::||:|:||||||.|||||||:..|    |:|.....||..:.|| .::..:..:..||:|
  Rat   322 VVSKVLHKSFLEVNEEGAEAAAATGVETR----ILSAPRTTEFTCNRPFIVFIKPNNTNSILFFG 382

  Fly   407 SV 408
            .|
  Rat   383 RV 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 137/385 (36%)
Serpinb3NP_001382662.1 serpin 1..387 CDD:476815 141/392 (36%)

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