DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and LOC299277

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_008763124.2 Gene:LOC299277 / 299277 RGDID:1595900 Length:420 Species:Rattus norvegicus


Alignment Length:387 Identity:106/387 - (27%)
Similarity:172/387 - (44%) Gaps:40/387 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGLASSDPEQIAHSFHQV 112
            |:.::|.:|:.:.|.:||.|||.||....|...|||:..|..::.:||....::..:|  ..|| 
  Rat    54 FAFSLYKELALKNPNKNIAFSPLSISAALASLSLGAKGNTLQEILEGLKFNLTETTEI--DIHQ- 115

  Fly   113 LAAYQD-----------SQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAAT 166
              .|:|           .||.| ||.:||....|:...|.:.....:.:...:.||.:..:|...
  Rat   116 --NYRDLLQRLSQPGGQGQISR-ANLLFVEKHLQILNGFKEKAKALYQTEVFATDFQQTCEARKF 177

  Fly   167 INNWVEQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVP 231
            ||::|..::...||::|..  |...:.:|::|.:.|.|.|...|....|....|.||..|.|:|.
  Rat   178 INDYVMIQSQGKIKEMVTE--LEERTSIVMLNFLLFTGQWSVPFDPDDTFMGKFILDSRRPVKVL 240

  Fly   232 MMSLKERFRYADLPA-------LDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQI 289
            ||..:      ||..       |....:||.||....:|.|:....|  :..:|..|...||.:.
  Rat   241 MMKTE------DLTTPYFWDEELKCTVVELNYKGHGKAMFILPDQGK--MEQVEASLHPGTLRKW 297

  Fly   290 TQSLYETKV-ALKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFI 353
            |.||....: .|.||:|......:|..:..:||:..:|:.||:... :...:.::||.:||...:
  Rat   298 TDSLKPRIIDELHLPKFSLSKTYKLENILPELGIMDVFNTQADLSG-IAGAKDVRVSQMIHNTVL 361

  Fly   354 EVNEEGTEAAAATGMAVRRKRAIMSPEEPIEFFADHPFTY-VLVHQKDLPLFWGSVVRLEEN 414
            .:.|.||||.|.|.:....:.|.:: :..:.|.  ..|.| ||....:|..|...|:...||
  Rat   362 GMAETGTEAEATTRVEYNFRPAKLN-DTFVNFV--RKFLYMVLEPNSELISFMRKVINPLEN 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 103/379 (27%)
LOC299277XP_008763124.2 serpinA3_A1AC 37..417 CDD:381019 104/382 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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