DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpinb6a

DIOPT Version :10

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_006253933.1 Gene:Serpinb6a / 291085 RGDID:735108 Length:400 Species:Rattus norvegicus


Alignment Length:363 Identity:120/363 - (33%)
Similarity:189/363 - (52%) Gaps:16/363 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LFSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGL---ASSDPEQIAHS 108
            :|::.:...|| :....||..||.||.....|..:||:..||:|:.|.|.|   :.:....:...
  Rat    31 IFALKLLKTLS-EDSSNNIFLSPISISAALTMVFMGAKGMTASQMVQTLSLDKCSGNGGGDVHQG 94

  Fly   109 FHQVLAAYQDS---QILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNV-QAAATINN 169
            |..:||....:   .:|:.||::|......:...|.....|.:.:..:.:||..:. |:...||.
  Rat    95 FQSLLAEVNKTGTQYLLKTANRLFGEKTCDILASFKDACRKFYEAEMEELDFKGDTEQSRQRINT 159

  Fly   170 WVEQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMS 234
            ||.::|...||:|:...:::.::.|||||||:|||.|..||.|..||...|.:.......|.||.
  Rat   160 WVAKKTEDKIKELLAPGIVDPDTVLVLVNAIYFKGNWDKQFNKEHTREKPFKVSKTEEKPVQMMF 224

  Fly   235 LKERFRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQ--SLYETK 297
            :|..|:...:..:....|.|||..::|:|:|:||:....|..:|::|......:.|:  .|.|.:
  Rat   225 MKSTFKMTYIGEIFTKILLLPYAGNELNMIIMLPDEHIELKTVEKELTYEKFIEWTRLDMLDEEE 289

  Fly   298 VALKLPRFKAEFQVELSEVFQKLGMSRMFSD-QAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTE 361
            |.:.|||||.|...::..|..||||:..|.: :|:|.. :.|.:.|.:|.:|||||:||||||||
  Rat   290 VEVFLPRFKLEENYDMKVVLGKLGMTDAFMEGRADFSG-IASKQGLFLSKVIHKAFVEVNEEGTE 353

  Fly   362 AAAATGMAVRRKRAIMSPEEPIEFFADHPFTYVLVHQK 399
            |.||||..:..:....:|    .|.|||||.:.:.|.|
  Rat   354 AVAATGSTITMRCLRFTP----RFLADHPFLFFIQHVK 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 120/363 (33%)
Serpinb6aXP_006253933.1 serpinB6_CAP 22..400 CDD:381031 120/363 (33%)

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