DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and HMSD

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_016881199.1 Gene:HMSD / 284293 HGNCID:23037 Length:217 Species:Homo sapiens


Alignment Length:181 Identity:44/181 - (24%)
Similarity:69/181 - (38%) Gaps:45/181 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 SIQTCAAMARLGAENETATQLDQGLGLASSDPE--QIAHSFHQVLAAYQ--DSQ-ILRIANKIFV 130
            ||.:..||..:||:..||.|:.|.|..:....|  .|...|..:|.|..  |:: :||.||.:|.
Human     2 SISSALAMVFMGAKGNTAAQMSQALCFSKIGGEDGDIHRGFQSLLVAINRTDTEYVLRTANGLFG 66

  Fly   131 MDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAAT-INNWVEQRTNHLIKDLVPADVLNSESRL 194
            ...|.....|.....|.:.:..:.:||..:.:.:.| :|:||..:|.                  
Human    67 EKSYDFLTGFTDSCGKFYQATIKQLDFVNDTEKSTTRVNSWVADKTK------------------ 113

  Fly   195 VLVNAIHFKGTWQHQFAKHLTRPDTFH-----------LDGERTVQVPMMS 234
                 :| |||.:|    |..||...|           .....|:.||:.:
Human   114 -----VH-KGTKKH----HQQRPHGLHDMALWTHQTLSCSASSTLSVPLQA 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 44/181 (24%)
HMSDXP_016881199.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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