DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpina3n

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_113719.3 Gene:Serpina3n / 24795 RGDID:3747 Length:418 Species:Rattus norvegicus


Alignment Length:403 Identity:123/403 - (30%)
Similarity:201/403 - (49%) Gaps:31/403 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLPLLGLALFPFPPVHTADVTMADAAHQEFAR-----RLALFSIN------VYGKLSGQKPGENI 65
            |:..:|.||..||.....:.|:   .|::..:     .|.|.|||      :|.||:.:.|.:|:
  Rat    10 LMAGIGSALLCFPDCILGEDTL---FHEDQDKGTQLDSLTLASINTDFAFSLYKKLALRNPDKNV 71

  Fly    66 VFSPFSIQTCAAMARLGAENETATQLDQGL--GLASSDPEQIAHSF-H--QVLAAYQDSQILRIA 125
            ||||.||....|:..|||:..:..::.:||  .|..:...:|...| |  |.|:..:|...:...
  Rat    72 VFSPLSISAALAVVSLGAKGNSMEEILEGLKFNLTETPETEIHRGFGHLLQRLSQPRDEIQISTG 136

  Fly   126 NKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDLVPADVLNS 190
            |.:|:....|:..||.:.....:.:.|.:.||.::.:|...||::|.::|...|:.|:..  |..
  Rat   137 NALFIEKRLQVLAEFQEKAKALYQAEAFTADFQQSREAKKLINDYVSKQTQGKIQGLITN--LAK 199

  Fly   191 ESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKE-RFRYADLPALDAMALEL 254
            ::.:||||.|:|||.|:..|....|....|:....|.|:||||.|:: ...|.....|:...:||
  Rat   200 KTSMVLVNYIYFKGKWKVPFDPRDTFQSEFYSGKRRPVKVPMMKLEDLTTPYVRDEELNCTVVEL 264

  Fly   255 PYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKV-ALKLPRFKAEFQVELSEVFQ 318
            .| ..:.|.|.:||: :..:..:|..|:..||.:...||..:.: .|.||:|.......|.:|..
  Rat   265 KY-TGNASALFILPD-QGKMQQVEASLQPETLRRWKDSLRPSMIDELYLPKFSISADYNLEDVLP 327

  Fly   319 KLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATGMAVRRKRAIMSPE-EP 382
            :||:..:||.||:... :...:.|.||.::|||.::|.|.|||||||||:    |...||.: :|
  Rat   328 ELGIKEVFSTQADLSG-ITGDKDLMVSQVVHKAVLDVAETGTEAAAATGV----KFVPMSAKLDP 387

  Fly   383 IEFFADHPFTYVL 395
            :....|.||..::
  Rat   388 LIIAFDRPFLMII 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 115/365 (32%)
Serpina3nNP_113719.3 serpinA3_A1AC 37..418 CDD:381019 115/373 (31%)
RCL 367..394 13/30 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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