DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpina4

DIOPT Version :10

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:430 Identity:122/430 - (28%)
Similarity:194/430 - (45%) Gaps:46/430 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CWLLPLLGLALFPF------PPVHTADVTMADAAHQ-----EFARRLALFSINVYGKLSGQKPGE 63
            |.||.|.||.....      .|.:|.:.|....:.|     :.|...|.|:..:|..::.|...:
  Rat     6 CLLLLLAGLLELSHSQPDQEEPDNTTNQTYRQFSQQNISSYQIASGNANFAFRLYHLIASQNSEK 70

  Fly    64 NIVFSPFSIQTCAAMARLGAENETATQLDQGLG--LASSDPEQIAHSF----HQVLAAYQDSQIL 122
            ||.|||.||....|:...||..:|..|:.:|||  |......:|...|    |.:...:.:.|| 
  Rat    71 NIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLTKLSLPEIHEGFRSLQHTIARPFTEPQI- 134

  Fly   123 RIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDLVPADV 187
            .:.:.:.:....|:..||...:...:.|.....:|.....|...|||:|:|.|...||:|| :| 
  Rat   135 SVGSALILSQNLQILSEFVSAIETSYNSKVLHANFRDKEAAVQLINNYVKQNTQGKIKNLV-SD- 197

  Fly   188 LNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMM-SLKERFRYADLPALDAMA 251
            |:.:.::||||.|.|:|.|:..|.........|::|....|::||| ..||...|.:...:....
  Rat   198 LSPDVKMVLVNYIFFQGLWKKPFPSSRVSTSDFYVDENTVVKIPMMLQDKEDHWYLEDRRVPCTV 262

  Fly   252 LELPYKDSDLSMLIVLPNTKTGLPALEEKL---RLTTLSQITQS-LYETKVALKLPRFKAEFQVE 312
            |.:.|: .|.....:||: :..:..:|:.|   .|....::.|: .:..|:.|:||:|......|
  Rat   263 LRMDYR-GDAVAFFILPD-QGKMNEVEQVLSPGMLLRWKRLLQNRFFYRKLILQLPKFSISNSYE 325

  Fly   313 LSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATG------MAVR 371
            |.|:...||...:|:..|.|.. :...|.|.:|.:.||..::|||.||:||||||      .|..
  Rat   326 LDEILPDLGFQDLFTPNANFSN-ISKKEKLYLSKVFHKTVLDVNEVGTKAAAATGSFATFFSAQP 389

  Fly   372 RKRAIMSPEEPIEFFADHPFTYVL--VHQKDLPLFWGSVV 409
            :||.::         .:.||..:|  ...:|: ||.|.||
  Rat   390 KKRYLI---------FNRPFLVILYSTSSQDI-LFMGKVV 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 108/380 (28%)
Serpina4NP_659565.2 serpinA4_KST 41..423 CDD:381020 113/395 (29%)

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