DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpina4

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:430 Identity:122/430 - (28%)
Similarity:194/430 - (45%) Gaps:46/430 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CWLLPLLGLALFPF------PPVHTADVTMADAAHQ-----EFARRLALFSINVYGKLSGQKPGE 63
            |.||.|.||.....      .|.:|.:.|....:.|     :.|...|.|:..:|..::.|...:
  Rat     6 CLLLLLAGLLELSHSQPDQEEPDNTTNQTYRQFSQQNISSYQIASGNANFAFRLYHLIASQNSEK 70

  Fly    64 NIVFSPFSIQTCAAMARLGAENETATQLDQGLG--LASSDPEQIAHSF----HQVLAAYQDSQIL 122
            ||.|||.||....|:...||..:|..|:.:|||  |......:|...|    |.:...:.:.|| 
  Rat    71 NIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLTKLSLPEIHEGFRSLQHTIARPFTEPQI- 134

  Fly   123 RIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDLVPADV 187
            .:.:.:.:....|:..||...:...:.|.....:|.....|...|||:|:|.|...||:|| :| 
  Rat   135 SVGSALILSQNLQILSEFVSAIETSYNSKVLHANFRDKEAAVQLINNYVKQNTQGKIKNLV-SD- 197

  Fly   188 LNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMM-SLKERFRYADLPALDAMA 251
            |:.:.::||||.|.|:|.|:..|.........|::|....|::||| ..||...|.:...:....
  Rat   198 LSPDVKMVLVNYIFFQGLWKKPFPSSRVSTSDFYVDENTVVKIPMMLQDKEDHWYLEDRRVPCTV 262

  Fly   252 LELPYKDSDLSMLIVLPNTKTGLPALEEKL---RLTTLSQITQS-LYETKVALKLPRFKAEFQVE 312
            |.:.|: .|.....:||: :..:..:|:.|   .|....::.|: .:..|:.|:||:|......|
  Rat   263 LRMDYR-GDAVAFFILPD-QGKMNEVEQVLSPGMLLRWKRLLQNRFFYRKLILQLPKFSISNSYE 325

  Fly   313 LSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATG------MAVR 371
            |.|:...||...:|:..|.|.. :...|.|.:|.:.||..::|||.||:||||||      .|..
  Rat   326 LDEILPDLGFQDLFTPNANFSN-ISKKEKLYLSKVFHKTVLDVNEVGTKAAAATGSFATFFSAQP 389

  Fly   372 RKRAIMSPEEPIEFFADHPFTYVL--VHQKDLPLFWGSVV 409
            :||.::         .:.||..:|  ...:|: ||.|.||
  Rat   390 KKRYLI---------FNRPFLVILYSTSSQDI-LFMGKVV 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 109/381 (29%)
Serpina4NP_659565.2 SERPIN 52..418 CDD:294093 109/381 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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