DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpina3n

DIOPT Version :10

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_033278.2 Gene:Serpina3n / 20716 MGIID:105045 Length:418 Species:Mus musculus


Alignment Length:411 Identity:129/411 - (31%)
Similarity:200/411 - (48%) Gaps:48/411 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LGL-------ALFPFPPVHTADVTMA-DAAHQE------FARRLALFSIN------VYGKLSGQK 60
            |||       |:..||     |.|:. |||.||      ....|.|.|||      :|.:|..:.
Mouse     7 LGLLMAGICPAVLCFP-----DGTLGMDAAVQEDHDNGTQLDSLTLASINTDFAFSLYKELVLKN 66

  Fly    61 PGENIVFSPFSIQTCAAMARLGAENETATQLDQGL--GLASSDPEQIAHSFHQVLAAY---QDSQ 120
            |.:||||||.||....|:..|||:..|..::.:||  .|..:....|...|..:|...   :|..
Mouse    67 PDKNIVFSPLSISAALAVMSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRLNQPKDQV 131

  Fly   121 ILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDLVPA 185
            .:...:.:|:....|:..||.:.....:.:.|.:.||.:..||...||::|.::|..:||:|| :
Mouse   132 QISTGSALFIEKRQQILTEFQEKARALYQAEAFTADFQQPRQAKKLINDYVRKQTQGMIKELV-S 195

  Fly   186 DVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKE----RFRYADLPA 246
            | |:..:.:||||.|:||..|:..|....|....|:....|.|.|||||:::    .||..:   
Mouse   196 D-LDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPVIVPMMSMEDLTTPYFRDEE--- 256

  Fly   247 LDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKV-ALKLPRFKAEFQ 310
            |....:||.| ..:.|.:.:||: :..:..:|..|:..||.:...||....: .|.||:|.....
Mouse   257 LFCTVVELKY-TGNASAMFILPD-QGKMQQVEASLQPETLRKWKNSLKPRMIDELHLPKFSISTD 319

  Fly   311 VELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATGMAVRRKRA 375
            ..|.:|..|||:..:||.||:. ..:...:.|:||.::|||.::|.|.|||||||||:    |..
Mouse   320 YSLEDVLSKLGIREVFSTQADL-SAITGTKDLRVSQVVHKAVLDVAETGTEAAAATGV----KFV 379

  Fly   376 IMSPE-EPIEFFADHPFTYVL 395
            .||.: .|:..:.:.||..::
Mouse   380 PMSAKLYPLTVYFNRPFLIMI 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 116/368 (32%)
Serpina3nNP_033278.2 serpinA3_A1AC 37..418 CDD:381019 116/376 (31%)
RCL 367..392 13/28 (46%)

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