DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpina1a

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001239498.1 Gene:Serpina1a / 20700 MGIID:891971 Length:436 Species:Mus musculus


Alignment Length:421 Identity:125/421 - (29%)
Similarity:204/421 - (48%) Gaps:25/421 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YRLVPCGCW-LLPLLGLAL----FPFPPVHTADVTMAD---AAHQEFARRLALFSINVYGKLSGQ 59
            :::.|...| ||.|.||..    |....|...|.:..|   |:| |.|..|..|:|::|.:|..|
Mouse    22 WKMTPSISWGLLLLAGLCCLVPSFLAEDVQETDTSQKDQSPASH-EIATNLGDFAISLYRELVHQ 85

  Fly    60 KPGENIVFSPFSIQTCAAMARLGAENETATQLDQGL--GLASSDPEQIAHSFHQVLAAYQ--DSQ 120
            ....||.|||.||.|..||..||::.:|.||:.:||  .|..:....|..||..:|....  ||:
Mouse    86 SNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQHLLQTLNRPDSE 150

  Fly   121 I-LRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDLVP 184
            : |...|.:||.:..:|.::|.:.....:.:...||:|:::.:|...||::||:.|...|.:.|.
Mouse   151 LQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNFAESEEAKKVINDFVEKGTQGKIAEAVK 215

  Fly   185 ADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKERFRYADLPALDA 249
            .  |:.::...|.|.|.|||.|:..|....|....||:|...||:||||:|...........|.:
Mouse   216 K--LDQDTVFALANYILFKGKWKKPFDPENTEEAEFHVDESTTVKVPMMTLSGMLHVHHCSTLSS 278

  Fly   250 MALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKVALKLPRFKAEFQVELS 314
            ..|.:.|..:..::.::..:.|  :..||:.|....:|:...:.......:..||.....:..|.
Mouse   279 WVLLMDYAGNATAVFLLPDDGK--MQHLEQTLSKELISKFLLNRRRRLAQIHFPRLSISGEYNLK 341

  Fly   315 EVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATGMAVRRKRAIMSP 379
            .:...||::|:|::.|:...:.:...|||:|..:|||.:.::|.||||||.|.:     :.:...
Mouse   342 TLMSPLGITRIFNNGADLSGITEENAPLKLSQAVHKAVLTIDETGTEAAAVTVL-----QMVPMS 401

  Fly   380 EEPIEFFADHPFTYVLVHQ-KDLPLFWGSVV 409
            ..||..| ||||.:::..: ...|:|.|.||
Mouse   402 MPPILRF-DHPFLFIIFEEHTQSPIFLGKVV 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 108/368 (29%)
Serpina1aNP_001239498.1 SERPIN 76..433 CDD:214513 108/366 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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