DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and srp-8

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:380 Identity:101/380 - (26%)
Similarity:173/380 - (45%) Gaps:24/380 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DAAHQEFARRLALFSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGLAS 99
            |..|:..::..|.|::.:   |..|...::.||||.:|..........|..||.:|:...|...:
 Worm     5 DKLHEFLSKSEAEFALKL---LHQQDHSQSFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNA 66

  Fly   100 SDPEQIAHSFHQV---LAAYQDSQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNV 161
            :|.|.:.| |..|   |:|.:....::|.|.|...:|.:........:...:.....|.|.....
 Worm    67 TDGEMVTH-FSNVSTALSAMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEK 130

  Fly   162 QAAATINNWVEQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFH--LDG 224
            :...|||..:.:.|:..||.:.....::.:..:|.::|..|:..||::|.|..|....|.  .:.
 Worm   131 ETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSKKEFFCTANS 195

  Fly   225 ERTVQVPMMSLKERFRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQI 289
            .|.::....:...| :|.:....  ..|.|||.||...|.|.||..:.||....:.|..:|:.::
 Worm   196 HRNIKFLHATGANR-KYCENDKF--QVLSLPYTDSSFEMTIFLPKEQFGLAEALKTLGTSTIQEL 257

  Fly   290 TQSLYETKVALKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIE 354
            ..::....|.:::|.::.|.:::|:...|.:|::::.::.|..|..   .|.:.:|..||||.||
 Worm   258 KSNVSNYLVNVQIPIWRNETEIDLNSTLQAIGITKILNESAYIGNF---AENVHISEFIHKAIIE 319

  Fly   355 VNEEGTEAAAATGMAVRRKRAIMSPEEPIE---FFADHPFTYVLVHQKDLPLFWG 406
            |||.||..|..|.:..:|.|     ||..|   |.|||||.|. :|.|:..||.|
 Worm   320 VNENGTSPATNTKVITKRWR-----EETGEIRDFIADHPFLYT-IHYKNSILFMG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 99/370 (27%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 99/371 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.830

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