DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and srp-7

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:359 Identity:123/359 - (34%)
Similarity:196/359 - (54%) Gaps:15/359 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGLASSDPEQIAHSFHQV----LA 114
            |.|..|...|::.|||.||....::..:.|:.||..|:.:.|...|:| ||:...|..:    ||
 Worm    21 GLLRQQNISESLAFSPLSIALALSLVHVAAKGETRDQIREALVKGSTD-EQLEQHFANISAALLA 84

  Fly   115 AYQDSQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLI 179
            |.:.::: ::||.:|...|::::|.:...:.|.:.:.|.|:||......|..|||:|.:.|...|
 Worm    85 AERGTEV-KLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHI 148

  Fly   180 KDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKERFR-YAD 243
            |.::.:|.:||:...||.||::||..||::|.|..|....|....:...::..:......| ||:
 Worm   149 KKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAE 213

  Fly   244 LPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKVALKLPRFKAE 308
            ....  ..|.|||||:..::.|.||.|:.||....:.|...|:..:..::..|.|.:::|::|.|
 Worm   214 NDQF--QVLSLPYKDNTFALTIFLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIE 276

  Fly   309 FQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATGMAVRRK 373
            .::.|.|..|.||:.:.|.:.|:.|.|   .:.|.||.:.|||.|||:||||:|||||.:::..|
 Worm   277 TKLGLEEALQSLGIKKAFDNDADLGNM---ADGLYVSKVTHKALIEVDEEGTKAAAATTVSISLK 338

  Fly   374 RAIMSPEEPIEFFADHPFTYVLVHQKD-LPLFWG 406
            .|:...|||.:|.|||||.:||  .|| .|||.|
 Worm   339 SAMFVMEEPKDFTADHPFFFVL--SKDNHPLFVG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 123/359 (34%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 123/359 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 209 1.000 Domainoid score I1654
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 0.433 Inparanoid score I2373
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.980

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