DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and srp-2

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:349 Identity:114/349 - (32%)
Similarity:189/349 - (54%) Gaps:22/349 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NIVFSPFSIQTCAAMARLGAENETATQLDQGLGLASSDPEQIAHSFHQVLAAYQDSQ---ILRIA 125
            ::|.||.||....|:...||...|..:|:..||     ..:|...|..::.|..|:.   ..:|.
 Worm    24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG-----GSRIFEEFSGLMEAVGDTDNGVETKIV 83

  Fly   126 NKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDLVPADVLNS 190
            |::||...|.:.|::.:.:.|.:.::.:|:|||:..|||.|:|.:||..||..||||:|||..|:
 Worm    84 NRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANN 148

  Fly   191 ESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMS-LKERFRYADLPALDAM--AL 252
             :...||||::||..||.:|||..|....|......:.|:|.:: |.|...|.:    |.:  .|
 Worm   149 -AFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDYTE----DVLFQVL 208

  Fly   253 ELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKVALKLPRFKAEFQVELSEVF 317
            .|.|.|...::.|.||..:.||....||:....:..:...|..:.|::::|:||.|.:::|.|..
 Worm   209 SLKYADPKFTLAIFLPKQRFGLVDALEKINGEYIQNLLNDLKSSYVSVQIPKFKIEKELDLKETL 273

  Fly   318 QKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATGMAVRRKRAIMSPEEP 382
            :.:|:..:|::.|:...:   .:.:.:|:.||||.|||:|:||.||||:...|:.:..||:  ||
 Worm   274 EAIGIKEIFAEGADLSGI---ADKVFISSGIHKAIIEVDEDGTTAAAASAFKVQLEMMIMA--EP 333

  Fly   383 IEFFADHPFTYVLVHQKDLPLFWG 406
            .:|.|||||.:.::.:.. .||.|
 Worm   334 TQFVADHPFLFAVLFENH-TLFLG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 114/349 (33%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 114/349 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 209 1.000 Domainoid score I1654
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 0.433 Inparanoid score I2373
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3483
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.910

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