DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpina3c

DIOPT Version :9

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:360 Identity:116/360 - (32%)
Similarity:187/360 - (51%) Gaps:24/360 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGL-ASSDPEQIAH-SFH 110
            |:.::|.||:.:.|..||||||.||....|:..|||:..|..::.:||.. .:..||...| .|.
Mouse    73 FAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETPEADIHQGFG 137

  Fly   111 QVL--AAYQDSQI-LRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVE 172
            .:|  .::...|: :...:.:||....|:..||.:.....:.:.|.:.||.:.::|...||::|.
Mouse   138 HLLQRLSHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEATKLINDYVS 202

  Fly   173 QRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLK- 236
            .:|...||.|: :| |::::.:||||.|:|||.|:..|....|....|:||.:|:|:||||.:| 
Mouse   203 NQTQRKIKGLI-SD-LDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSVKVPMMKIKT 265

  Fly   237 ---ERFRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKV 298
               ..||..:   |....:||.|| .:.|.|.:||: :..:..:|..|:..||.:...||...|:
Mouse   266 LTTPYFRDEE---LSCTVVELKYK-GNASALFILPD-QGRMQQVEASLQPETLRKWKNSLRPRKM 325

  Fly   299 A-LKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEA 362
            . |.||:|.......|..:..:||:..:||.||:... :...:.|.||.::|||.::|.|.|||.
Mouse   326 GELYLPKFSISTDYSLKNILPELGIKEIFSKQADLSG-ITGTKDLIVSQMVHKAVLDVAETGTEG 389

  Fly   363 AAATGMAVRRKRAIMSPEEPIEFFADHPFTYVLVH 397
            .||||:..|    |:|....:.|  :..|..|:.|
Mouse   390 VAATGVNFR----ILSRRTSLWF--NRTFLMVISH 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 SERPIN 45..408 CDD:238101 116/360 (32%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 116/360 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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