DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42Da and Serpina3a

DIOPT Version :10

Sequence 1:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:Serpina3a / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:381 Identity:112/381 - (29%)
Similarity:198/381 - (51%) Gaps:28/381 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGL--GLASSDPEQIAHSFH 110
            |:.::|.:|..:.|.:|||||.|||.|...:..|||:|.|..::.:||  .|..:...:|...:.
  Rat    44 FAFSLYKELVLKNPDKNIVFSSFSISTALVLLSLGAKNNTLKEILEGLKFNLTETPEAEIHQGYE 108

  Fly   111 QVLAAYQ---DSQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVE 172
            .:|....   |...:...:.:|:....|:..||.:.....:.:.|.|.||.:..:|...||::|.
  Rat   109 HLLQRLNLPGDQVQISTGSALFIKKHLQILAEFQEKARALYQAEAFSTDFQQPHEAKKLINDYVR 173

  Fly   173 QRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKE 237
            ::|...||:|:  .||:.::.:||||.|:|||.|:..|..|.|....|:||.:::|:||||.:::
  Rat   174 KQTQGKIKELI--SVLDKKTSMVLVNYIYFKGKWKMPFDPHDTFQSEFYLDEKKSVKVPMMKIEK 236

  Fly   238 ----RFRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKV 298
                .||..:   |....|||.| ..:.|.|.:||: :..:..:|..|:..||.:...:|...::
  Rat   237 LTTPYFRDEE---LSCSVLELKY-TGNASALFILPD-QGRMQQVEASLQPETLRRWKDTLRPRRI 296

  Fly   299 -ALKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEA 362
             .|::|:|.....:.|.::..:||:..:||.||:..: :...:.|.||.::|||.::|.|.||||
  Rat   297 DELRMPKFSISTDMRLGDILPELGIREVFSQQADLSR-ITGAKDLSVSQVVHKAVLDVTETGTEA 360

  Fly   363 AAATGMAVRRKRAIMSPEEPIEFFADHPFTYVL----VHQKDLPLFWGSVVRLEEN 414
            |||||:.:   ..:.:....:..:.:.||..::    .|   :.||...|...:|:
  Rat   361 AAATGVKI---IPMCAKFYYVTMYFNRPFLMIISDTNTH---IALFMAKVTNPKED 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 110/372 (30%)
Serpina3aXP_006240581.2 serpinA3_A1AC 27..408 CDD:381019 111/377 (29%)

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