DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and AT1G62170

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001185292.1 Gene:AT1G62170 / 842513 AraportID:AT1G62170 Length:466 Species:Arabidopsis thaliana


Alignment Length:449 Identity:110/449 - (24%)
Similarity:189/449 - (42%) Gaps:117/449 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KGQQNFAVSMLNVIRQS-TPNENVFFSPYSTYHAL------------------LLAYFGSSGDTE 83
            |.|.:.|:.:..::..| ..|.|..|||.|...||                  :|::..||...|
plant    69 KKQNDVAIFLTGIVISSVAKNSNFVFSPASINAALTMVAASSGGEQGEELRSFILSFLKSSSTDE 133

  Fly    84 -----KELAKVLHLD---------------WAD--------SKEVVRSAYI-----LEKMNRKER 115
                 :|:|.|:.:|               |.|        ||::.::.:.     ::..::...
plant   134 LNAIFREIASVVLVDGSKKGGPKIAVVNGMWMDQSLSVNPLSKDLFKNFFSAAFAQVDFRSKCNV 198

  Fly   116 QSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQIDFKSQTEESRKQINDWIAKQTHDQIRNM 180
            .:|:.|..|..:.||..:.|...:.|..|.||||            |.::|.|.:..|:..|:::
plant   199 LNKLGLAVSLLESIFHISTLFDFKFALIRSAEEV------------RTEVNAWASSHTNGLIKDL 251

  Fly   181 LSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQL 245
            |....:|..|..|..:|.|.||.|..::....|...|||.  .|.:.||:     .|:.:.::|.
plant   252 LPRGSVTSLTDRVYGSALYFKGTWEEKYSKSMTKCKPFYL--LNGTSVSV-----PFMSSFEKQY 309

  Fly   246 RA-----HVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRLNADS--LDDS 303
            .|     .||:||||     |.::::    |.:.:|.:.||. ....|:|:|.|:.:..  ||..
plant   310 IAAYDGFKVLRLPYR-----QGRDNT----NRNFAMYIYLPD-KKGELDDLLERMTSTPGFLDSH 364

  Fly   304 LKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLTSETISIGDSKHVAKIKV 368
            ..:...:..:..:|||:.|...|.:...:.      |:..|:.:    .:|:          |::
plant   365 NPERRVKVGKFRIPKFKIEFGFEASSAFSD------FELDVSFY----QKTL----------IEI 409

  Fly   369 DEEGSTAAAATVLFT-YRSA----RPVEPAKFECNHPFLFVIYDRTSRSILFTGIYRDP 422
            ||:|:.|    |.|| :|||    ..|:|..|..:|||||:|.:..:.::||.|...||
plant   410 DEKGTEA----VTFTAFRSAYLGCALVKPIDFVADHPFLFLIREEQTGTVLFAGQIFDP 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 107/443 (24%)
AT1G62170NP_001185292.1 SERPIN 69..464 CDD:294093 108/447 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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