DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Ea and AT1G51330

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_175544.1 Gene:AT1G51330 / 841556 AraportID:AT1G51330 Length:193 Species:Arabidopsis thaliana


Alignment Length:127 Identity:35/127 - (27%)
Similarity:62/127 - (48%) Gaps:9/127 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 LAEEVQQIDFK--SQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQ 207
            |::|.:::...  :..||.|.::|.|..:.|:..|:|:|....:|.:|..:..||.|.||.|.::
plant    17 LSKEAKEVVHAAVNGAEEVRMEVNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWENK 81

  Fly   208 FKTEKTVPMPFYTSPSNYSLVSMM---QQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDS 266
            |....|:..||:.......||..|   ::|.....|..:.||  :||  ||..::...::.|
plant    82 FGKSMTIHKPFHLVNGKQVLVPFMKSYERKYMKAYNGFKVLR--ILQ--YRVDYKDTSRQFS 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 35/127 (28%)
AT1G51330NP_175544.1 serpin <11..>139 CDD:476815 34/125 (27%)

Return to query results.
Submit another query.