DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and AT2G35580

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_181101.1 Gene:AT2G35580 / 818123 AraportID:AT2G35580 Length:374 Species:Arabidopsis thaliana


Alignment Length:410 Identity:106/410 - (25%)
Similarity:176/410 - (42%) Gaps:73/410 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 YKGQQNFAVSMLN----VIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADS 97
            ||...:...|:.|    |:|.:.|..||..|       ::.|......||..::..:|.....|.
plant    11 YKAMMDLKESVGNQNDIVLRLTAPLINVILS-------IIAASSPGDTDTADKIVSLLQASSTDK 68

  Fly    98 KEVVRSAYILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQ----QIDFKSQT 158
            ...| |:.|:..:......|..| ..|:|:.::....|:|....::.|....:    ::||:::.
plant    69 LHAV-SSEIVTTVLADSTASGGP-TISAANGLWIEKTLNVEPSFKDLLLNSYKAAFNRVDFRTKA 131

  Fly   159 EESRKQINDWIAKQTHDQIRNML-SADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSP 222
            :|..:::|.|:.|||:..|.|:| |..:..|.|..:.|||.:..|:|.|||.       |..|..
plant   132 DEVNREVNSWVEKQTNGLITNLLPSNPKSAPLTDHIFANALFFNGRWDSQFD-------PSLTKD 189

  Fly   223 SNYSLVSMMQQKGTFL-------LNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLIL 280
            |::.|:...:.:..|:       .:|.|..:  |:.|.||     :.:|||     ...||.:.|
plant   190 SDFHLLDGTKVRVPFMTGASCRYTHVYEGFK--VINLQYR-----RGREDS-----RSFSMQIYL 242

  Fly   281 PPFNSNSLEDVLSRLNADS--LDDSLKQAMPREI----EVSLPKFEFEQRLELNPILAKMGVSKM 339
            |. ..:.|..:|.||.:..  |.|:  :.:|...    |:.:|:|:|:...|.:..|...|:   
plant   243 PD-EKDGLPSMLERLASTRGFLKDN--EVLPSHSAVIKELKIPRFKFDFAFEASEALKGFGL--- 301

  Fly   340 FDESVATFDDLTSETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAK--FECNHPFL 402
                          .:.:....|.:.|:|||.||.||||.........|| .|.|  |..:||||
plant   302 --------------VVPLSMIMHKSCIEVDEVGSKAAAAAAFRGIGCRRP-PPEKHDFVADHPFL 351

  Fly   403 FVIYDRTSRSILFTGIYRDP 422
            |::.:..|..:||.|...||
plant   352 FIVKEYRSGLVLFLGQVMDP 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 102/403 (25%)
AT2G35580NP_181101.1 plant_SERPIN 8..371 CDD:238998 104/408 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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