DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and SRP2

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:433 Identity:113/433 - (26%)
Similarity:184/433 - (42%) Gaps:98/433 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QRLNLYKGQQN-FAVSML---NVIRQSTPNENVFFSPYS---------------TYHALLLAYFG 77
            |::::.:..:| ..||:|   .||.....|.|..|||.|               |..:.:|::..
plant    27 QKIDMQEAMKNQNEVSLLLVGKVISAVAKNSNCVFSPASINAVLTVTAANTDNKTLRSFILSFLK 91

  Fly    78 SSGDTE-----KELAKVLHLDWADSK----EVVRSAYILEKMNRKERQSKMPLEFSSADRIFFAN 133
            ||...|     .|||.|:..|.:::.    ..|...::.:.::.......:.|.|..|.   || 
plant    92 SSSTEETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNFFKAS---FA- 152

  Fly   134 DLHVTECARNRLAEEVQQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAA 198
                             ::||:.:.||.|..:|.|.::.|:|.|:.:|....:|..|..:..||.
plant   153 -----------------KVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNAL 200

  Fly   199 YLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQ-LRAH----VLQLPYRTVF 258
            |.||.|...|....|...||:.  .|...||:     .|:.:.::| :.|:    ||:||||   
plant   201 YFKGAWEKAFDKSMTRDKPFHL--LNGKSVSV-----PFMRSYEKQFIEAYDGFKVLRLPYR--- 255

  Fly   259 ESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRL--NADSLDDSLKQAMPREIEVSLPKFEF 321
              |.::|:    |.:.||.|.||. ....|:::|.|:  |...||..:.:......:..:|||:.
plant   256 --QGRDDT----NREFSMYLYLPD-KKGELDNLLERITSNPGFLDSHIPEYRVDVGDFRIPKFKI 313

  Fly   322 EQRLELNPILAKMGVSKMFDESVATFDDLTSETISIGDSKH-VAKIKVDEEGSTAAAATVLFTYR 385
            |...|.:.:                |:|     ..:..|.| .|.|::||||:.|||||.:....
plant   314 EFGFEASSV----------------FND-----FELNVSLHQKALIEIDEEGTEAAAATTVVVVT 357

  Fly   386 SARPVEPAK---FECNHPFLFVIYDRTSRSILFTGIYRDPKTI 425
            .:...||.|   |..:|||||:|.:..:.::||.|...||..:
plant   358 GSCLWEPKKKIDFVADHPFLFLIREDKTGTLLFAGQIFDPSEL 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 110/424 (26%)
SRP2NP_179060.1 serpinP_plants 36..397 CDD:381001 110/419 (26%)

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