DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Serpinb11

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_080143.1 Gene:Serpinb11 / 66957 MGIID:1914207 Length:388 Species:Mus musculus


Alignment Length:403 Identity:114/403 - (28%)
Similarity:200/403 - (49%) Gaps:48/403 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLD---------WADSK 98
            |.:.:...:..:...||:||||.:|::||.:...|:.|.:.:::.||||.|         ..:|.
Mouse    11 FCLDVFKELSSNNVGENIFFSPLTTFYALSMLLLGTRGKSAEQMEKVLHYDSFSGVLKAKTKNSS 75

  Fly    99 E-----VVRSAY--ILEKMNRKERQSKMPLEFSSADRIFFANDL----HVTECARNRLAEEVQQI 152
            |     |:...:  ::..:|::.       ..|.|:||:....:    ....|.......::|.:
Mouse    76 ECSQVGVMHPDFRALISHINQQN-------SLSVANRIYGTRSISFHKQYVRCCEKLYQAKLQTV 133

  Fly   153 DFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMP 217
            ||:..|||:||.||.|:..:|:.:|.|:.:...|.|.:.:||.:|.|.||||.::|:..:||..|
Mouse   134 DFELSTEETRKSINAWVKNKTNGKITNLFAKGTIDPSSVMVLVSAIYFKGQWQNKFQKRETVKAP 198

  Fly   218 FYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPP 282
            |:......::|:||.|.|||.|.:.::....||:|||               .|:.:.|:::| |
Mouse   199 FHMGVGKSAVVNMMYQTGTFKLAIIKEPEMQVLELPY---------------ANNKLRMIILL-P 247

  Fly   283 FNSNSLEDVLSRLNADSLDD--SLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVA 345
            ..:.|:..:...||...|.:  :....:.||::|.:|||....:.:||.:|..:|:..:|:.:.|
Mouse   248 VGTASVSQIEKHLNVKMLREWTNPSNMVEREVDVHIPKFSLSVKYDLNTLLKSLGMRDIFNVANA 312

  Fly   346 TFDDLTSET-ISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLFVIYDRT 409
            ....::.:. :.:....|.:.:.|:|||:.|||||.........|| ..:|..|.||||.|:|. 
Mouse   313 DLSGMSPDKGLYLSKVVHKSYVDVNEEGTEAAAATGESISVKRLPV-TVQFTANCPFLFFIWDE- 375

  Fly   410 SRSILFTGIYRDP 422
            |.:|||.|.:..|
Mouse   376 SGNILFAGKFASP 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 113/398 (28%)
Serpinb11NP_080143.1 SERPIN 4..388 CDD:294093 113/401 (28%)
RCL. /evidence=ECO:0000250 338..362 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6118
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.870

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