DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and SERPINB4

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_002965.1 Gene:SERPINB4 / 6318 HGNCID:10570 Length:390 Species:Homo sapiens


Alignment Length:406 Identity:124/406 - (30%)
Similarity:200/406 - (49%) Gaps:36/406 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NLYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKE 99
            :|.:....|...:....|:|..| |:|:||.|...||.:...|:..:|.::::||||.|......
Human     3 SLSEANTKFMFDLFQQFRKSKEN-NIFYSPISITSALGMVLLGAKDNTAQQISKVLHFDQVTENT 66

  Fly   100 VVRSA-YILEKMNRKERQ-SKMPLEF---SSADRIFFANDL----------HVTECARNRLAEEV 149
            ..::| |.:::......| .|:..||   :.|..:..||.|          ...:..:......|
Human    67 TEKAATYHVDRSGNVHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYQFLQEYLDAIKKFYQTSV 131

  Fly   150 QQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTV 214
            :..||.:..|||||:||.|:..||:::|:|:.....|...|.|||.||.|.||||.::||.|.|.
Human   132 ESTDFANAPEESRKKINSWVESQTNEKIKNLFPDGTIGNDTTLVLVNAIYFKGQWENKFKKENTK 196

  Fly   215 PMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLI 279
            ...|:.:.:.|..|.||:|..:|...:.|.::|.||::||:               ..|:||:::
Human   197 EEKFWPNKNTYKSVQMMRQYNSFNFALLEDVQAKVLEIPYK---------------GKDLSMIVL 246

  Fly   280 LPPFNSNSLEDVLSRLNADSLDD--SLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDE 342
            ||. ..:.|:.:..:|.|:.|.:  ||:......:::.||:|:.|:..:|...|..||:..:|:.
Human   247 LPN-EIDGLQKLEEKLTAEKLMEWTSLQNMRETCVDLHLPRFKMEESYDLKDTLRTMGMVNIFNG 310

  Fly   343 SVATFDDLT-SETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLFVIY 406
            . |....:| |..:|:....|.|.::|.|||..|||||.:.....:.|....:|.|||||||.|.
Human   311 D-ADLSGMTWSHGLSVSKVLHKAFVEVTEEGVEAAAATAVVVVELSSPSTNEEFCCNHPFLFFIR 374

  Fly   407 DRTSRSILFTGIYRDP 422
            ...:.||||.|.:..|
Human   375 QNKTNSILFYGRFSSP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 122/397 (31%)
SERPINB4NP_002965.1 SERPIN 4..390 CDD:320777 123/403 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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