DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and SERPINB3

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_008850.1 Gene:SERPINB3 / 6317 HGNCID:10569 Length:390 Species:Homo sapiens


Alignment Length:409 Identity:123/409 - (30%)
Similarity:199/409 - (48%) Gaps:42/409 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NLYKGQQNFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKE 99
            :|.:....|...:....|:|..| |:|:||.|...||.:...|:..:|.:::.||||.|......
Human     3 SLSEANTKFMFDLFQQFRKSKEN-NIFYSPISITSALGMVLLGAKDNTAQQIKKVLHFDQVTENT 66

  Fly   100 VVRSA-YILEKMNRKERQ-SKMPLEF---SSADRIFFANDL----------HVTECARNRLAEEV 149
            ..::| |.:::......| .|:..||   :.|..:..||.|          ...:..:......|
Human    67 TGKAATYHVDRSGNVHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSV 131

  Fly   150 QQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTV 214
            :.:||.:..|||||:||.|:..||:::|:|::....|...|.|||.||.|.||||..:|..|.|.
Human   132 ESVDFANAPEESRKKINSWVESQTNEKIKNLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTK 196

  Fly   215 PMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLI 279
            ...|:.:.:.|..:.||:|..:|.....|.::|.||::||:               ..|:||:::
Human   197 EEKFWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYK---------------GKDLSMIVL 246

  Fly   280 LPPFNSNSLEDVLSRLNADSLDD--SLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDE 342
            ||. ..:.|:.:..:|.|:.|.:  ||:......:::.||:|:.|:..:|...|..||:..:|:.
Human   247 LPN-EIDGLQKLEEKLTAEKLMEWTSLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFNG 310

  Fly   343 SVATFDDLTSETISIG----DSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLF 403
            ..    ||:..|.|.|    ...|.|.::|.|||:.|||||.:..:.|:......:|.|||||||
Human   311 DA----DLSGMTGSRGLVLSGVLHKAFVEVTEEGAEAAAATAVVGFGSSPTSTNEEFHCNHPFLF 371

  Fly   404 VIYDRTSRSILFTGIYRDP 422
            .|....:.||||.|.:..|
Human   372 FIRQNKTNSILFYGRFSSP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 121/400 (30%)
SERPINB3NP_008850.1 serpinB3_B4_SCCA1_2 1..390 CDD:381030 122/407 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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