DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and LOC569077

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001188383.1 Gene:LOC569077 / 569077 -ID:- Length:384 Species:Danio rerio


Alignment Length:412 Identity:125/412 - (30%)
Similarity:186/412 - (45%) Gaps:71/412 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADS-----KEVVR 102
            ||:.:...:..|:...|:||||.|....|.:.|.|:.|||..|:.:||.|.....     :.::.
Zfish    11 FALDLYQALSASSAEGNIFFSPLSISAVLSMVYLGARGDTAAEMERVLSLSSVSDVHSHFESLIS 75

  Fly   103 S------AYILEKMNR---KERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQIDFKSQT 158
            |      :|||...||   ::..|.:|....|..:::.|               |:|.:||...:
Zfish    76 SINSPSASYILRLANRLYGEKSFSFLPECLDSTMKLYHA---------------ELQTVDFIGAS 125

  Fly   159 EESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPS 223
            |.||:.||.|:.|||.::||::|....:|..|||.|.||.|.||:|...|:.:.|..|.|..:..
Zfish   126 EGSRQLINKWVEKQTENKIRDLLKPGMVTTMTRLALVNAIYFKGKWTHTFQAKYTREMAFKINQK 190

  Fly   224 NYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSN-- 286
            ....|.||.|..........:.:..||:|||               ...::||:::||....:  
Zfish   191 ESHPVRMMHQLNKLPFRCLPEYKLQVLELPY---------------IQQELSMLILLPDETKDGS 240

  Fly   287 ----------SLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFD 341
                      :||.:|...|.|.:|..      ..:.|.||||:.|....|:..|.|||:|.:|.
Zfish   241 DPLLKLEKELTLEKLLDWTNRDKMDTQ------GAVIVHLPKFKLEIESCLSETLEKMGMSSVFQ 299

  Fly   342 ESVATFDDLT----SETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRS--ARPVEPAKFECNHP 400
            |:.|   |||    :..:.:....|.|.:.|.|||:.|||||.::...|  .||.....|..:||
Zfish   300 ETKA---DLTGMGSNGGLFVSAVIHKAFVDVSEEGTEAAAATCVYIITSYVPRPEPRYYFTADHP 361

  Fly   401 FLFVIYDRTSRSILFTGIYRDP 422
            |:|.|....|.:|||.|.||.|
Zfish   362 FMFFIRHNPSNNILFLGRYRSP 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 122/407 (30%)
LOC569077NP_001188383.1 SERPIN 5..383 CDD:294093 124/410 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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