DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpina10a

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001038536.2 Gene:serpina10a / 565064 ZFINID:ZDB-GENE-041014-246 Length:391 Species:Danio rerio


Alignment Length:396 Identity:100/396 - (25%)
Similarity:188/396 - (47%) Gaps:57/396 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NFAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLD-WADSKEVVRSAY 105
            :||..:.:.|..|: ::||..|......||.....|:.|.|:.||.:.:.:| .....|..|...
Zfish    35 DFATRLYSKIASSS-DDNVAVSTLGATLALATLAAGAGGATQSELLQGIGVDSMVKDGEQERIQN 98

  Fly   106 ILEKMNRKERQSKMPLEFSSADRIFFANDLHVTECARNRLAE----EVQQIDFKSQTEESRKQIN 166
            ||:::  :|..:::|     |..:|...|:...:...|::.:    :||.::: :..::::..||
Zfish    99 ILQQL--REDAAQIP-----ATGLFIKQDVKADDSFSNQVKQYYNADVQNVNY-ANGQQAKGSIN 155

  Fly   167 DWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMM 231
            |::..:|.:::|:::  :.:.|::..:|.:||:..||||..|....|....||.:..|...|.||
Zfish   156 DYVRGRTGEKVRDVV--ENVDPQSMAILISAAFFTGQWLQPFNATFTQEDRFYVNKYNIVQVPMM 218

  Fly   232 QQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRLN 296
            .:.|.:.|..|...:..:|:||.               ||. |:|:::||.      |||    :
Zfish   219 LRSGKYYLAYDPTFKVGILKLPC---------------ENG-IAMLVLLPD------EDV----D 257

  Fly   297 ADSLDDSLKQAMPR---------EIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLTS 352
            ...:|:|:...:.|         ::|:.||:|..:|...|:..|..:||.::|..:.......:|
Zfish   258 YTYVDESMTGEVFRGWVAKLKKTKLEIQLPRFSLKQSNSLSVSLPSLGVKEIFGNTANLTGISSS 322

  Fly   353 ETISIGDSKHVAKIKVDEE-GSTAAAATVLFTYRSARPVEPAKFECNHPFLFVIYDRTSRSILFT 416
            |.:.:.:.:....:.|||. ||.|.|:..||    ..|: |.:...|.||:||:|...::.||:.
Zfish   323 EGLKLSEVEQKVAVDVDESGGSLAEASGNLF----MNPL-PPRLTFNRPFIFVVYHEVTKCILYI 382

  Fly   417 GIYRDP 422
            |...||
Zfish   383 GRVVDP 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 98/391 (25%)
serpina10aNP_001038536.2 Serpin 33..388 CDD:278507 98/394 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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