DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Ea and serpina7

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_021331940.1 Gene:serpina7 / 564060 ZFINID:ZDB-GENE-041010-47 Length:425 Species:Danio rerio


Alignment Length:426 Identity:110/426 - (25%)
Similarity:191/426 - (44%) Gaps:59/426 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LCGVE------PDAGLLDQRLNLYKGQQNFAVSMLNVIRQST--PNENVFFSPYSTYHALLLAYF 76
            :||.:      |.:..|...:|:   ..:||..:...:.:|.  .::|:||||:|...||.....
Zfish    32 VCGNQETLQQPPISAKLPSLINM---NNDFAFHLYKRLIESPDYQSKNIFFSPFSVSMALSELSL 93

  Fly    77 GSSGDTEKELAKVLHLDWA-DSKEVVRSAY--ILEKM-NRKERQSKMPLEFSSADRIFFANDLHV 137
            |:.|||:::|...:..:.| .|.|.:...:  :||:: ||.|....:.....::||.        
Zfish    94 GAGGDTKQQLLSGIGYNSAIFSTEEMHQLFHSLLEEIGNRTEVDIDVGTALYASDRF-------- 150

  Fly   138 TECARNRLAEEVQQ--------IDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVL 194
              ...::..|::::        :||  ..:|:..|||.::.::||.:|..  :.|.:...|.:.|
Zfish   151 --KPHSKFLEDMKEFYHSDGFTVDF--SVKETVDQINKYVEEKTHGKISQ--AVDNLEKDTLMFL 209

  Fly   195 ANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFE 259
            ....|.||:|...||.|.|....||........|.||.|.....:..|.:|...||.|.|     
Zfish   210 LTYIYFKGKWDKPFKPETTSESTFYIDDKTTVPVQMMHQYEHLKVYYDVELFTKVLCLDY----- 269

  Fly   260 SQEKEDSSPDENSDISMVLILPP--FNSNSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFE 322
                       |...||:|.:|.  ....:::|:...::...::...:....|::::.:||...:
Zfish   270 -----------NDSFSMILAVPDVYMKQKTMKDLEMTVSRQHIEKWRRSVSERKVDIYVPKLSLK 323

  Fly   323 QRLELNPILAKMGVSKMFDESVATFDDLTSETISIGDSKHVAKIKVDEEGSTAAAAT-VLFTYRS 386
            ....|..||..||::.||.:. |.|..::.|.|.:....|.|.:.:||:|:||||.| |.....|
Zfish   324 TSYSLKDILKGMGMTDMFSDK-ADFTGVSEENIFVSKVLHKATLDIDEQGTTAAAVTGVEIRPTS 387

  Fly   387 ARPVEPAKFECNHPFLFVIYDRTSRSILFTGIYRDP 422
            ..|:...||:  |||:..|.|:|:.:|||.|...:|
Zfish   388 YDPLSDLKFD--HPFMIFITDQTNDNILFVGKVVNP 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 104/396 (26%)
serpina7XP_021331940.1 alpha-1-antitrypsin_like 54..418 CDD:239011 104/399 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.