DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn88Ea and serpini1

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001122164.1 Gene:serpini1 / 557627 ZFINID:ZDB-GENE-060503-390 Length:415 Species:Danio rerio


Alignment Length:442 Identity:115/442 - (26%)
Similarity:203/442 - (45%) Gaps:62/442 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LMAVLPAIALAGLC-----GVEPDAGLLDQRLNLYKGQQNFAVSMLNVIRQSTPNENVFFSPYST 67
            |:.|||.:.|...|     .|..|.            ...|:|.:.:.::.|:..||:.|||.|.
Zfish     3 LLVVLPPLLLLRGCFCQASDVPEDV------------TAEFSVRLYHQLQISSGEENIIFSPLSV 55

  Fly    68 YHALLLAYFGSSGDTEKELAKVL-HLDWADSKEVVRSAYILEKMNRKERQSKMPLEFSSADRIFF 131
            ..||.:...|:.|.:.:|:.:.: :..:.:.:|......:.:.::..|.|..:.|    |:.:|.
Zfish    56 ALALGMVELGARGSSLQEIRQAVGYSHFREDEEFSLLRNLSQALSTDEEQYVVRL----ANSLFL 116

  Fly   132 ANDLHVTE----CARNRLAEEVQQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRL 192
            .:.:|..|    ..:.....||:.:|| ||:....::||.|:...|..:|:|::||::.:..|.:
Zfish   117 QSGVHFNEDFLQLMKKYFRAEVETVDF-SQSTAVAERINSWVLNHTESKIQNLVSAEDFSSSTMI 180

  Fly   193 VLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLN--VDEQLRA----HVLQ 251
            :|.||.|.:|.|.:||:.|.|....|.....:.....||.|:|.|...  .|....|    .||:
Zfish   181 MLVNAVYFRGSWKNQFRPENTRTFSFTRDDGSEVQTLMMYQQGDFYYGEFSDGTTEAGGVYQVLE 245

  Fly   252 LPYRTVFESQEKEDSSPDENSDISMVLILP----PFNSNSLEDVLSRLNADSLDDSLKQAMPREI 312
            :.|               |..|:||:::||    |.  .|||.:   :.|..|::.......:::
Zfish   246 MLY---------------EGEDMSMMIVLPRQEVPL--ASLEPI---IKAPLLEEWANNVKRQKV 290

  Fly   313 EVSLPKFEFEQRLELNPILAKMGVSKMF----DESVATFDDLTSETISIGDSKHVAKIKVDEEGS 373
            ||.||:|:.||:::|...|.::|:..:|    |.|..|......:.:.||.:...|.::|.|||:
Zfish   291 EVYLPRFKVEQKIDLRESLQQLGIRSIFSKDADLSAMTAQMTDGQDLFIGKAVQKAYLEVTEEGA 355

  Fly   374 TAAAATVLFTYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTGIYRDPKTI 425
            ..||.:.:........:.| :...:|||.|:|.:|.:.||||.|...:|:.|
Zfish   356 EGAAGSGMIALTRTLVLYP-QVMADHPFFFIIRNRKTGSILFMGRVMNPELI 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 105/398 (26%)
serpini1NP_001122164.1 SERPIN 25..414 CDD:294093 108/420 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.