DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpine3

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001116709.1 Gene:serpine3 / 556612 ZFINID:ZDB-GENE-050309-223 Length:417 Species:Danio rerio


Alignment Length:405 Identity:100/405 - (24%)
Similarity:179/405 - (44%) Gaps:53/405 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEVVRSAYIL 107
            |.:|:...:.::....|:..||.|....|.|...|:.|:|..:|...|..|..|    ||...||
Zfish    37 FGISLYQTLTETENKSNLIVSPASVSLCLGLLQLGARGNTLVQLEGTLGYDVND----VRVQNIL 97

  Fly   108 EKMNRKERQSKMPLEFSSADRIFFANDLH-VTECARNRLA---EEVQQIDFKSQTEESRKQINDW 168
            .:.......|...|....|:.:|....:. :.|..::.|.   ..:..::| |....:..::..|
Zfish    98 SRPQGDLANSSEGLRLQLANALFIQTGVKLLPEFTQHALGWGNTSLLSVNF-SNPNHTHSRLQQW 161

  Fly   169 IAKQT----HDQIRNML--SADEITPRTR------LVLANAAYLKGQWLSQFKTEKTVPMPFYTS 221
            ...|:    |.|.|..|  |:.|....||      :.|.:.....|.|..||...:|..:||..|
Zfish   162 AHYQSKADDHLQTREELHHSSGEEEEATRQDHLLYMALVSTLVFHGAWQKQFLFTETQNLPFTFS 226

  Fly   222 PSNYSLVSMMQQK-----GTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILP 281
            ..:...|.||.|.     |.|.|..:::..  ||:|||.               :..:.:::.||
Zfish   227 DGSTVKVPMMYQSSEVNIGHFRLPSEQEYT--VLELPYL---------------DHSLRLLVALP 274

  Fly   282 PFNSNSLEDVLSRLNADSL---DDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDES 343
            ......|..:..::.|.::   |..|::.   ::::.||:|:.:.::.|.|:|..:|||.:|..|
Zfish   275 SDRKTPLSQLEKQITARAVGLWDTGLRRT---KMDIFLPRFKMQSKINLKPVLQSLGVSDIFSPS 336

  Fly   344 VATFDDLT-SETISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLFVIYD 407
            .|.|..:: ::.|.:.::.|.|:|:|.|.|:.||:||.:...:.:|   .|.|:.:.||||::..
Zfish   337 AADFRGISDTDGIFVSEAFHEARIEVTEAGTKAASATAMVLLKRSR---SAVFKADRPFLFILRQ 398

  Fly   408 RTSRSILFTGIYRDP 422
            .::.|:||.|...:|
Zfish   399 ISTGSLLFIGRVVNP 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 99/400 (25%)
serpine3NP_001116709.1 Serpin 35..413 CDD:278507 99/403 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

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