DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpini2

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001015754.1 Gene:serpini2 / 548471 XenbaseID:XB-GENE-980167 Length:410 Species:Xenopus tropicalis


Alignment Length:392 Identity:106/392 - (27%)
Similarity:180/392 - (45%) Gaps:42/392 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 AVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDW-ADSKEVVRSAYIL 107
            ||.:...|..|...||:.|||..|...|.:...|:.|....::.:.|.|.. .||:|......:|
 Frog    35 AVDLSRAIHSSCTEENIIFSPLGTSLILGMIKLGARGAALSQIQQALKLQGNQDSEEFSELKTLL 99

  Fly   108 EKMNRKERQSKMPLEFSSADRIFFANDLHVTE----CARNRLAEEVQQIDFKSQTEESRKQINDW 168
            ..::.:.::    ..|:.|:.::......|.|    ..|:.....::.:||: ..:.|.:.|::|
 Frog   100 AVISEENKE----FTFNLANALYLQEGFQVKEQYLHSNRDVFNSAIKLVDFQ-DVKASAETISEW 159

  Fly   169 IAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQ 233
            :.:|||.:|..|.|:.:.||.|::||.||.|.||:|..:|..|.|....|.........|.||..
 Frog   160 VQRQTHGKISKMFSSGDFTPLTKMVLVNALYFKGEWKQKFSVEATHSEEFSVKRGLTVKVPMMHL 224

  Fly   234 KGTFLLNVDEQLRA--HVLQLPYRTVFESQEKEDSSPDENSDISMVLILP--PFNSNSLEDVLSR 294
            :.|..|.......|  .||:|||:               ....|::|.||  ......||.:::.
 Frog   225 QTTTKLGYFSVKNASYKVLELPYK---------------GDKFSLLLTLPAEDVEIGELEKIVTA 274

  Fly   295 LNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLT--SETISI 357
            ....:....:|:.:   :|:|||:|:.|.:::|......:.::.:|:|..    ||:  :|:.::
 Frog   275 TMIKTWFADMKEEV---VEISLPRFKVEHKIDLKKSFLNLNITDIFNEGC----DLSGITESPNL 332

  Fly   358 GDSKHVAKI--KVDEEGSTAAAATVLFTYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTGIYR 420
            ..||...|:  :::||||.|||:|.:..  ||..:...:|..|.||||.|....|..|||.|...
 Frog   333 YISKVFQKVFLEINEEGSEAAASTGMQV--SAMSMSSHRFAANRPFLFFIRHIQSGMILFMGKVM 395

  Fly   421 DP 422
            :|
 Frog   396 NP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 105/387 (27%)
serpini2NP_001015754.1 serpin 28..397 CDD:393296 105/390 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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