DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Spn28F

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster


Alignment Length:396 Identity:113/396 - (28%)
Similarity:190/396 - (47%) Gaps:55/396 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLHLDWADSKEVVRSAY-- 105
            ||.....::.:.....|:..||.|...||.:||.|:...|.:|:..||.|  .|.|:.|.:.|  
  Fly    17 FADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL--PDDKKEVAAKYKD 79

  Fly   106 ILEKMNRKERQSKMPLEFSSADRIFFANDLHV----TECARNRLAEEVQQIDFKSQTEESRKQIN 166
            :|.|:..:|:.:.:.|    |:||:......:    .:..::....|.:.||.....:.| ..:|
  Fly    80 LLSKLEGREKVATLSL----ANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKAS-SIVN 139

  Fly   167 DWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMM 231
            :|:..||..:|::::|::::: :..|::.||.|.||||..:|..:.|....|..|......|.||
  Fly   140 NWVDNQTRGKIKDLVSSNDMS-KMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMM 203

  Fly   232 QQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRLN 296
            ....:|....|.:|.|.:::||||               ||.:||::.||.             .
  Fly   204 SLFQSFRAAHDSELGAKIIELPYR---------------NSSLSMLIFLPD-------------Q 240

  Fly   297 ADSLDDSLKQAM---PR----EIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVATFDDLT-SE 353
            .|.|.:..|:.:   |:    ::.:.||||:.|...:||.:|..||:...|::| |.|.||. :.
  Fly   241 VDGLSELEKKIVGFKPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKS-ADFKDLVENS 304

  Fly   354 TISIGDSKHVAKIKVDEEGSTAAAATVLFTYRSARPVEPAK--FECNHPFLFVIYDRTSRSILFT 416
            .:.:....|.|.|:|:|||:.|||||.|...|.:.|:..::  |..:|||.:||.||  .:|.|.
  Fly   305 NVHVKKVIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDR--ETIYFQ 367

  Fly   417 GIYRDP 422
            |.:..|
  Fly   368 GHFVKP 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 112/391 (29%)
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 112/391 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446262
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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