DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpinc1

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001008153.1 Gene:serpinc1 / 493515 XenbaseID:XB-GENE-975782 Length:456 Species:Xenopus tropicalis


Alignment Length:473 Identity:134/473 - (28%)
Similarity:219/473 - (46%) Gaps:67/473 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHILSISLMAVLPA-----------------IALAGLC------------GVEPDAGLLDQRL-- 34
            |::||:.|:::|.:                 |.|..:|            ..|.:....:|::  
 Frog     1 MYLLSLLLLSLLGSGYLQSQNADICLAKPKDIPLTPMCVYRKTLEAVEAEEKEKEPAQQEQKVPE 65

  Fly    35 -------NLYKGQQNFAVSMLNVIRQSTPN-ENVFFSPYSTYHALLLAYFGSSGDTEKELAKVLH 91
                   .|.:....||::....:..|..| ||:|.||.|...|..:|..|:..:|.|||.:|.:
 Frog    66 STNPRVYELSQANAKFAIAFYKNLADSKQNTENIFMSPLSISQAFTMAKLGACNNTLKELMEVFY 130

  Fly    92 LDWADSKEVVRSAYILEKMN-RKERQSKMPLEFSSADRIFFANDLHVTECARNRLAE-----EVQ 150
            .|....:...:..|...|:| |..|::....|..|.:|:|....|...|..:: ::|     ::.
 Frog   131 FDTISERASDQIHYFFAKLNCRLFRKANKSSELVSVNRLFGEKSLTFNETYQD-ISELVYGAKLL 194

  Fly   151 QIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVP 215
            .::||.:.|.||:.||:|::.:|..:|.:::....|||.|.|||.||.|.||.|.|:|.:|.|..
 Frog   195 PLNFKEKPELSREIINNWVSDKTEKRITDVIPVGVITPDTVLVLINAIYFKGLWKSKFNSENTKM 259

  Fly   216 MPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLIL 280
            ..||...||:.|.:.|.|:|.|..:..:.....||:|||:               ..||:|||:|
 Frog   260 EQFYPDESNHCLAATMYQEGIFRYSSFKDDGVQVLELPYK---------------GDDITMVLVL 309

  Fly   281 PPFNSNSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVA 345
            |. ....|..|...|..:.|.:.|:::...::.|.||:|..|....:...|.:||:..:||.:.|
 Frog   310 PS-PETPLMKVEQNLTLEKLGNWLQKSRELQLSVYLPRFRVEDSFSVKEKLQQMGLVDLFDPNSA 373

  Fly   346 TFDDLTS---ETISIGDSKHVAKIKVDEEGSTAAAAT-VLFTYRSARPVEPAKFECNHPFLFVIY 406
            ....:.:   ..:.:.|:.|.|.::|:||||.|||:| |:.|.||.. :....|..|.|||..|.
 Frog   374 KLPGIVAGGRTDLYVSDAFHKAFLEVNEEGSEAAASTAVILTGRSLN-LNRITFRANRPFLVFIR 437

  Fly   407 DRTSRSILFTGIYRDPKT 424
            :....|:||.|...:|.|
 Frog   438 EVAINSVLFMGRVANPCT 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 121/390 (31%)
serpinc1NP_001008153.1 serpinC1_AT3 61..455 CDD:381002 124/411 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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