DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Spn43Aa

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster


Alignment Length:425 Identity:126/425 - (29%)
Similarity:198/425 - (46%) Gaps:51/425 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HILSISLMAVLPAIALAGLCGVEPDAGLLDQRLNLYKGQQNFAVSMLNVIRQSTPNENVFFSPYS 66
            |.|||.|:.|          .:....||    .|..|.:..||..:...:.....:|||..||.|
  Fly     3 HWLSIILLGV----------WISAPEGL----GNTIKDRNLFATELFQTLATDRQDENVIISPVS 53

  Fly    67 TYHALLLAYFGSSGDTEKELAKVLHLDWADSKEVVRSAYILEKMNRKERQSKMPLEFSSADRIFF 131
            ...||.|||:|:.|.|..||.|.||....:||:.:..:|  ..:.....:||..||.  |::::.
  Fly    54 IQLALGLAYYGAEGRTAAELQKTLHASAKESKDGLAESY--HNLLHSYIKSKTVLEI--ANKVYT 114

  Fly   132 ANDL----HVTECARNRLAEEVQQIDFKSQTEESRKQINDWIAKQTHDQIRNMLSADEITPRTRL 192
            ..:|    |..|.|:.....||:.:||..:| |:.:|||.|:.:||.::|..::  :.:.|.|.:
  Fly   115 RQNLTVSSHFREVAQKYFDSEVEPLDFSRET-EAVEQINRWVKQQTENKIERVV--ESLEPDTNV 176

  Fly   193 VLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTV 257
            .|.||.|.|.:|...|..|.|....|:.|.|....|..|.....:......:|.|..::|.:   
  Fly   177 ALVNAIYFKARWARPFNDEDTRDREFWLSESRSIQVPTMFADNWYYYADYPELDAKAIELFF--- 238

  Fly   258 FESQEKEDSSPDENSDISMVLILPPFNS--NSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKFE 320
                        ||.:::|..|||...|  .:||..|..::.:.|:|..:.   :.:.|.||||:
  Fly   239 ------------ENINLTMWFILPNQRSGLQALEQKLKGVDFNLLEDRWQW---QSVSVYLPKFK 288

  Fly   321 FEQRLELNPILAKMGVSKMFDESVATFDDLTSET---ISIGDSKHVAKIKVDEEGSTAAAATVLF 382
            ||...:|.|.|.|||:|.||.:: |.|.::..::   ..|...:|...|.|:|.|..||.|:...
  Fly   289 FEFDTDLRPTLHKMGISAMFSDA-ADFSNIFQDSPIGTRITKVQHKTFIDVNEIGCEAAGASYAA 352

  Fly   383 TYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTG 417
            ....:.|::|..|..:|||.|:|.|:  .::.|||
  Fly   353 GVPMSLPLDPKTFVADHPFAFIIRDK--HAVYFTG 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 116/388 (30%)
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 116/386 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446281
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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