DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and Spn43Ab

DIOPT Version :10

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster


Alignment Length:425 Identity:108/425 - (25%)
Similarity:174/425 - (40%) Gaps:48/425 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHILSISLMAVLPAIALAGLCGVEPDAGLLDQRLNLYKGQQNFAVSMLNVIRQSTPNENVFFSPY 65
            |.::...|:.:|..::.:...|.:..|   |:.|        .|..:.|.:.....||||..||.
  Fly     1 MAVIISCLLLLLATVSQSKTVGYDAAA---DRNL--------LAADLYNAVAADHLNENVVISPA 54

  Fly    66 STYHALLLAYFGSSGDTEKELAKVLHLDWADSKEV-VRSAYILEKMNRKERQSKMPLEFSSADRI 129
            :...::.||:.|:.|.|..||.:.|.|...|:..| .||....:.:.|..       .|..|:.|
  Fly    55 TIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVSQRSGSYQQALTRDN-------NFRLANNI 112

  Fly   130 FFANDLH----VTECARNRLAEEVQQIDF-KSQTEESRKQINDWIAKQTHDQIRNMLSADEITPR 189
            :...:|.    ..:.|:.:....:.::|| ....:.:...||..:|.:|:.:|.::|.|:.:..|
  Fly   113 YINENLEFKGSFRDVAQRQFDSNIDKLDFHPPYNKRTADGINRAVATKTNGKITDILRAELLNDR 177

  Fly   190 TRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPSNYSLVSMMQQKGTFLLNVDEQLRAHVLQLPY 254
            |..|:.|.......|...|:.:||....|.|.......|..|.....|.......|.|.|::|||
  Fly   178 TEGVIVNGVSYSAAWQKAFRLDKTEKRSFRTGSGQSVKVDTMWTLQNFNYAEVNSLDAKVVELPY 242

  Fly   255 RTVFESQEKEDSSPDENSDISMVLILPPFNSNSLEDVLSRLNADSLDDSLKQAMPREIEVSLPKF 319
                           :|.|.||:|:||. ..:.|..:...|:..:|...:.....:::||.||||
  Fly   243 ---------------QNPDFSMLLLLPN-RKDGLRSLQQSLSGKNLLAEIGAMSQQKVEVLLPKF 291

  Fly   320 EFEQRLELNPILAKMGVSKMFDESVATFDDLTSETIS--IGDSKHVAKIKVDEEGSTAAAATVLF 382
            .....|.|.....|:||..||... ..|.::....:|  |...:|.|.::|.|.|......|.|.
  Fly   292 SVTFGLGLEGPFKKLGVHTMFSRD-GDFGNMYRMFVSHFINAVEHKANVEVTEAGVDQPLETGLL 355

  Fly   383 TYRSARPVEPAKFECNHPFLFVIYDRTSRSILFTG 417
            ....:|   ..|||.:|||:|.|  :...||.|.|
  Fly   356 KGLFSR---SKKFEADHPFVFAI--KYKDSIAFIG 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 serpin_crustaceans_chelicerates_insects 36..422 CDD:381059 101/390 (26%)
Spn43AbNP_001027395.1 serpin42Dd-like_insects 27..390 CDD:381070 104/399 (26%)

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