DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn88Ea and serpinb1

DIOPT Version :9

Sequence 1:NP_524954.2 Gene:Spn88Ea / 49804 FlyBaseID:FBgn0028984 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001002653.1 Gene:serpinb1 / 436926 ZFINID:ZDB-GENE-040718-400 Length:380 Species:Danio rerio


Alignment Length:408 Identity:134/408 - (32%)
Similarity:192/408 - (47%) Gaps:67/408 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 FAVSMLNVIRQSTPNENVFFSPYSTYHALLLAYFGSSGDTEKELAKVL--------HLDWADSKE 99
            ||:.:...:..|:...|:||||.|...||.:.|.|:.|||..|:.|||        |..:.....
Zfish    11 FALDLYRALSASSAEGNIFFSPLSISAALSMVYLGARGDTAGEMEKVLSFSSVSDVHSHFESLIS 75

  Fly   100 VVRS---AYILEKMNR---KERQSKMPLEFSSADRIFFANDLHVTECARNRLAEEVQQIDFKSQT 158
            .:.|   :|||...||   ::..|.:|...||:..::.|               ::|.:||...:
Zfish    76 SINSPSASYILRLANRLYGEKTFSFLPEYLSSSLNLYHA---------------DLQAVDFIGAS 125

  Fly   159 EESRKQINDWIAKQTHDQIRNMLSADEITPRTRLVLANAAYLKGQWLSQFKTEKTVPMPFYTSPS 223
            |:||:.||.|:.:||.::||::|....:|..|||.|.||.|.||.||.:|..:.|..|||..:..
Zfish   126 EQSRQLINKWVEEQTENKIRDLLKPGMVTGMTRLALVNAIYFKGNWLQRFNAQDTKEMPFKINQK 190

  Fly   224 NYSLVSMMQQKGTFLLNVDEQLRAHVLQLPYRTVFESQEKEDSSPDENSDISMVLILPPFNSNSL 288
            ....|.||.||..|..|.....|..||:|||       .||        ::||:::||....:. 
Zfish   191 ENRPVQMMYQKKKFPFNYIYDHRVQVLELPY-------VKE--------ELSMLILLPEETQDG- 239

  Fly   289 EDVLSRLNADSLDDSLKQAMPR-------EIEVSLPKFEFEQRLELNPILAKMGVSKMFDESVAT 346
            .|.|.:|.::...|.|.:...|       :|.|.||:|:.|....|..||..||:|.:|.|..| 
Zfish   240 SDPLLKLESELTIDKLHEWTNRNNMDTQTDIIVHLPRFKLEIESSLVEILMGMGMSSVFQEGKA- 303

  Fly   347 FDDLTSET----ISIGDSKHVAKIKVDEEGSTAAAAT---VLFTYRSARPVEPAKFECNHPFLFV 404
              |||..|    :.:....|.|.:.|:|||:.|||||   |.|..     :....|..:|||||.
Zfish   304 --DLTGMTGHGGLFLSAVAHKAFVDVNEEGTEAAAATAAIVAFCM-----LREEHFMADHPFLFY 361

  Fly   405 IYDRTSRSILFTGIYRDP 422
            |....:.||||.|.:|.|
Zfish   362 IRHNPTNSILFFGRFRGP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn88EaNP_524954.2 SERPIN 39..419 CDD:238101 132/403 (33%)
serpinb1NP_001002653.1 SERPIN 5..379 CDD:294093 133/406 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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